Thermus thermophilus JL-18: TtJL18_0218
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Entry
TtJL18_0218 CDS
T02009
Name
(GenBank) DNA-directed DNA polymerase III PolC
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ttl
Thermus thermophilus JL-18
Pathway
ttl03030
DNA replication
ttl03430
Mismatch repair
ttl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ttl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TtJL18_0218
03430 Mismatch repair
TtJL18_0218
03440 Homologous recombination
TtJL18_0218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttl03032
]
TtJL18_0218
03400 DNA repair and recombination proteins [BR:
ttl03400
]
TtJL18_0218
Enzymes [BR:
ttl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TtJL18_0218
DNA replication proteins [BR:
ttl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TtJL18_0218
DNA repair and recombination proteins [BR:
ttl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TtJL18_0218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
T2SSK
DUF655
Motif
Other DBs
NCBI-ProteinID:
AFH38134
UniProt:
H9ZP74
LinkDB
All DBs
Position
complement(194831..198496)
Genome browser
AA seq
1221 aa
AA seq
DB search
MGRKLRFAHLHQHTQFSLLDGAAKLSDLLKWVKETTPEDPALAMTDHGNLFGAVEFYKKA
TEMGIKPILGYEAYVAAESRFDRKRGKGLDGGYFHLTLLAKDFTGYQNLVRLASRAYLEG
FYEKPRIDREILREHSEGLIALSGCLGAEIPQFILQDRLDLAEARLNEYLAIFGDRFFIE
IQNHGLPEQKKVNEVLKEFARKYGLGMVATNDGHYVKREDARAHEVLLAIQSKTTLDDPN
RWRFPCDEFYVKTPEEMRAMLPEEEWGDEPFDNTVEIARMCNVDLPIGDKMVYRIPRFPL
PEGRTEAQYLRELTFLGLLRRYPDRITGAFYREVFRFLGKIPPHGDERALAAALAQVEEK
AWEDLKKRLPPLEGVREWTAEAILHRALYELSVIERMGFPGYFLIVQDYINWAKAHGVSV
GPGRGSAAGSLVAYAVGITNIDPLRFGLLFERFLNPERVSMPDIDTDFSDRERDRVIQYV
RERYGEDKVAQIGTLGSLASKAALKDVARVYGIPHKKAEELAKLIPVQFGRPRPLQEAIQ
VVPELRAEMEKDPKVREVLEVAMRLEGLNRHASVHAAGVVIAAEPLTDLVPLMRDQEGRP
VTQYDMGAVEALGLLKMDFLGLRTLTFLDEAKRIVKASQGVELDYDALPLDDPKTFALLS
RGETKGVFQLESGGMTATLRGLKPRRFEDLIAILSLYRPGPMEHIPTYIRRHHGLEPVSY
SEFPHAEKYLKPILDETYGIPVYQEQIMQIASAVAGYSLGEADLLRRAMGKKKVAEMQKH
RERFVQGAKERGVPEEEANRLFDMLEAFANYGFNKSHAAAYSLLSYQTAYVKAHYPVEFM
AALLSVERHDSDKVAEYIRDARAMGIEVLPPDVNRSGFDFLVQGRQILFGLSAVKNVGEA
AAEAILRERERGGPYRSLGDFLKRLDEKVLNKRTLESLIKAGALDGLGERARLLASLEGL
LRWAAETREKARSGMMGLFGEVEEPPLAEAAPLDEITRLRYEKEALGIYVSGHPILRYPG
LRETATCTLEELPDLARDLPPRSRVLLAGMVEEVVRKPTKSGGMMARFVLSDETGALEAV
AFGRAYDQVSPRLKEDTPVLVLAEVEREEGGVRVLAQAVWTYEELEQVPRALEVEVEASL
LDDRGVAHLKSLLDEHAGTLPLYVRVQGAFGEALLALREVRVGEEAVGALEAEGFRAYLL
PDREVLLQGGQAGEAQEAVPF
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcaagctccgcttcgcccacctccaccagcacacccagttctccctcctggac
ggggcggcgaagctttccgacctcctcaagtgggtcaaggagacgacccccgaggaccct
gccctggccatgaccgaccacggcaacctcttcggggccgtggagttctacaagaaggcc
accgaaatgggcatcaagcccatcctgggctacgaggcctacgtggcggcggaaagccgc
tttgaccgcaagcggggcaagggtttggacgggggctacttccacctcacccttctcgcc
aaggacttcacggggtaccagaacctggtccgcctggcaagccgggcttatctggagggg
ttttacgaaaagccccggattgaccgggagatccttcgggagcacagcgaaggcctcatc
gccctctcggggtgcctcggggcggagatcccccagttcatcctccaggaccgcctggac
ctggccgaggcccggctcaacgagtacctcgccatcttcggcgaccgcttcttcatagag
atccagaaccacggcctccccgagcagaaaaaggtcaacgaggtcctcaaggagttcgcc
cgcaagtacggcctgggcatggtggccaccaacgacggccactacgtgaaaagggaggac
gcccgcgcccacgaggtccttctcgccatccagtccaagaccaccctggacgaccccaat
cgctggcgttttccctgcgacgagttctacgtgaagaccccggaggagatgcgggccatg
ctccccgaggaggagtggggggacgagccctttgacaacaccgtggagatcgcccgaatg
tgcaacgtggacctccccatcggggacaagatggtctaccgcatcccccgcttccccctt
cccgaggggcgcaccgaggcccagtacctcagggagctcaccttcctgggcctcctcagg
cgctaccccgaccgcatcaccggggccttctaccgggaggtcttccgctttttgggaaag
atacccccccacggggacgaaagggccctggctgcggccctggcccaggtggaggagaag
gcctgggaggacctgaaaaagcgccttcctcccttagagggggtccgggagtggaccgcg
gaggccatcctgcaccgggccctttacgagctttccgtcattgagcgcatgggcttcccc
ggctacttcctcatcgtccaggactacatcaactgggccaaggcgcacggggtttccgtg
gggccgggaagggggagcgccgccgggagcctggtggcctacgccgtgggcatcaccaac
attgaccccttgcgcttcggcctcctctttgagcgcttcctgaaccccgagcgggtttcc
atgcccgacatcgacacggacttttccgaccgggagcgggaccgggtgatccagtacgtg
cgggagcgctacggcgaggacaaggtggcccagatcggcaccctaggaagccttgcctcc
aaggccgccctcaaggacgtggcccgggtttacggcatcccccacaagaaggcggaggag
ctcgccaagctcatccccgtgcagttcggcaggcccaggcctttgcaggaggccatccag
gtggtgccggagcttagggcggagatggagaaggaccccaaggtgagggaggtcctcgag
gtggccatgcgcctcgagggcctaaaccgccacgcctccgtccacgccgccggggtggtg
atcgccgccgagcccctcacggacctcgtccccctcatgcgcgaccaggaagggcggccc
gttacccagtacgacatgggggcggtggaggccttgggccttttgaagatggactttttg
ggcctccgcaccctcaccttcctggacgaggccaagcgcatcgtcaaggcgtcccagggg
gtggagctggactacgatgccctccccctggacgaccccaagaccttcgccctcctctcc
cggggggagaccaaaggggttttccagctggaatcgggggggatgaccgccacgcttcgc
ggcctcaagccccggcgctttgaggacctcatcgccatcctctccctctaccgcccgggc
cccatggagcacatccccacctacatccgccgccaccacgggctggagcccgtgagctac
agcgagtttccccacgccgagaagtacctaaagcccatcctggacgagacctacggcatc
cccgtctaccaggagcagatcatgcaaatcgcctcggccgtggcggggtactccctagga
gaagcggacctcctccggcgggccatgggcaagaagaaggtggcggagatgcagaagcac
cgggagcgcttcgtccagggggccaaggaaaggggcgtgcccgaggaggaggccaaccgc
ctctttgacatgctggaggctttcgccaactacggcttcaacaaatctcatgcagcggcc
tacagcctcctctcctaccagaccgcctacgtgaaggcccactaccccgtggagttcatg
gccgccctcctctccgtggagcggcacgactccgacaaggtggccgagtacatccgcgac
gcccgggccatgggcatagaggtccttcccccggacgtcaaccgctccgggtttgacttt
ctggtccagggccggcagatcctcttcggcctctccgcggtgaaaaacgtgggcgaggcg
gcggcggaggccattctccgggagcgggagcggggcggcccctaccggagcctcggggac
ttcctcaagcggctggacgagaaggtgctcaacaagcggaccctggagtccctcatcaag
gcgggtgccctggacggcctcggggaaagggcgcggctcctcgcctccctggaggggctc
ctcaggtgggcggccgagacccgggagaaggcccgctcgggcatgatgggcctcttcggc
gaggtggaggagccgcctttggccgaggccgcccccctggacgagatcacccggctccgc
tacgagaaggaggccctggggatctacgtctccggccaccctatcttgcggtaccccggg
ctccgggagacggccacctgcaccctggaggagcttcccgacctggcccgggacctgccg
ccccggtctagggtcctcctcgccgggatggtggaggaggtggtgcgcaagcccacaaag
agcggcgggatgatggcccgcttcgtcctctccgacgagacgggggcgcttgaggcggtg
gccttcggccgggcctacgaccaggtctccccgaggctcaaggaggacacccccgtgctc
gtcctcgccgaggtggagcgggaggaagggggcgtgcgggtgctggcccaggccgtttgg
acctacgaggagctggagcaggtcccccgggccctcgaggtggaggtggaggcctccctc
ctggacgaccggggggtggcccacttgaaaagcctcctggacgagcacgcggggaccctc
cccctgtacgtccgggtccagggcgccttcggcgaggccctcctcgccctgagggaggtg
cgggtgggggaggaggccgtgggggccctcgaggccgaggggttccgggcctacctcctg
cccgaccgggaggtcctcctccagggcgggcaggcgggggaggcccaggaggcggtgccc
ttctag
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