Thermus thermophilus JL-18: TtJL18_0482
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Entry
TtJL18_0482 CDS
T02009
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
ttl
Thermus thermophilus JL-18
Pathway
ttl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ttl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TtJL18_0482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttl03021
]
TtJL18_0482
03400 DNA repair and recombination proteins [BR:
ttl03400
]
TtJL18_0482
Enzymes [BR:
ttl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TtJL18_0482
Transcription machinery [BR:
ttl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TtJL18_0482
DNA repair and recombination proteins [BR:
ttl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TtJL18_0482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
AstB
Motif
Other DBs
NCBI-ProteinID:
AFH38390
UniProt:
H9ZPY0
LinkDB
All DBs
Position
424181..424480
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AA seq
99 aa
AA seq
DB search
MAEPGIDKLFGMVDSKYRLTVVVAKRAQQLLRHGFKNTVLEPEERPKMQTLEGLFDDPNA
VTWAMKELLTGRLVFGENLVPEDRLQKEMERLYPVEREE
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaccgggcattgacaagctcttcggcatggtggactccaagtaccggctcacc
gtggtggtggccaaaagggcgcagcaactcctccgccacggcttcaagaacacggtcttg
gagccggaggagaggcccaagatgcagaccctcgaggggctttttgacgaccccaacgcc
gtgacctgggccatgaaggagctcctcacgggccggttggtcttcggcgagaacctggtg
cccgaggaccggctccaaaaggagatggagcggctctacccggtggagcgggaggagtag
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