Thermus thermophilus JL-18: TtJL18_0620
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Entry
TtJL18_0620 CDS
T02009
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ttl
Thermus thermophilus JL-18
Pathway
ttl03420
Nucleotide excision repair
ttl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ttl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TtJL18_0620
03430 Mismatch repair
TtJL18_0620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttl03400
]
TtJL18_0620
Enzymes [BR:
ttl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TtJL18_0620
DNA repair and recombination proteins [BR:
ttl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TtJL18_0620
MMR (mismatch excision repair)
Other MMR factors
TtJL18_0620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_11
FGF
DUF3553
ResIII
Motif
Other DBs
NCBI-ProteinID:
AFH38525
UniProt:
H9ZQB5
LinkDB
All DBs
Position
549483..551564
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AA seq
693 aa
AA seq
DB search
MSDALLAPLNEAQRQAVLHFEGPALVVAGAGSGKTRTVVHRVAYLVARRGVFPSEILAVT
FTNKAAEEMRERLRGLVPGAGEVWVSTFHAAALRILRVYGERVGLRPGFVVYDEDDQTAL
LKEVLKELALSARPGPIKALLDRAKNRGVGLEALLGELPEYYAGLSRGRLADVLVRYQEA
LKAQGALDFGDILLYALRLLKEDEEVLRLVRKRARFIHVDEYQDTSPVQYRFTRLLAGEE
ANLMAVGDPDQGIYSFRAADIKNILDFTRDYPEARVYRLEENYRSTEAILRLANAVIVKN
ALRLEKALRPVKRGGEPVRLYRAEDAREEARFVAEEIARLGPPWDRYAVLYRTNAQSRLL
EQALAGRGIPARVVGGVGFFERAEVKDLLAYARLALNPLDAVSLKRVLNTPPRGIGPATW
ARVQLLAQEKGLPPWEALKEAARTSSRVEPLRHFVALVEELQDLVFGPAEAFFRHLLEAT
DYPTYLREAYPEDAEDRLENVEELLRAAKEAEDLQDFLDKVALTAKAEEPAEAEGKVALM
TLHNAKGLEFPVVFLVGVEEGLLPHRNSLSTLEGLEEERRLFYVGITRAQERLYLSHAEE
REVYGRREPARPSRFLEEVEEGLYEVYDPYRVPKPAPPPHRPRPGAFRGGERVVHPRFGP
GTVVAAQGDEVTVHFEGFGLKRLSLKYAELRPA
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgccctcctagcccccctcaacgaggcccagcgccaggcggtcctccacttt
gaggggcccgccctggtggtggccggggcggggagcgggaagacccgcaccgtggtccac
cgggtggcctacctcgttgcccgccggggggtctttccctcggagatcctggccgtcacc
ttcaccaacaaagccgcggaggagatgcgggagcgcctccgggggctggtcccgggggcg
ggggaggtctgggtctccaccttccacgccgccgcgctaaggatcctccgcgtctacggg
gagcgggtgggcctcaggcccggcttcgtggtctacgacgaggacgaccagaccgccctc
ctcaaggaggtcctgaaggagctcgccctctcggcccggcccggccccatcaaggccctt
ttggaccgggcgaagaaccggggcgtgggcctcgaggccctcctcggcgagcttcccgag
tactacgccgggctttcccggggaaggcttgcggacgtcctggtgcgctaccaggaggcc
cttaaggcccagggggccttggacttcggggacatcctcctctacgccctgaggctttta
aaggaggacgaagaggtcctcaggctcgtgcgcaagcgggcccgcttcatccacgtggac
gagtaccaggacacgagccccgtccagtaccgcttcacccggcttctcgccggggaggag
gccaacctcatggccgtgggcgaccccgaccaggggatctactccttccgggcggcggac
atcaagaacatcctggacttcacccgggactaccccgaggcccgggtctaccgcctggag
gagaactaccgctccaccgaggccattctccgcctcgccaacgccgtgatcgtgaagaac
gccctccgcctggaaaaggccctgcgcccggtgaagcggggcggggagcccgtgcgcctc
taccgggcggaggacgcccgggaggaggcccgcttcgtggccgaggagatcgcccggctc
ggccccccttgggaccggtacgccgttctttaccgcaccaacgcccaaagccgccttctg
gagcaggccttggcggggcgggggatcccggcgcgggtggtggggggtgtgggcttcttt
gaaagggccgaggtcaaggacctcctggcctacgcccgcctcgccctcaaccccctggac
gccgtgagcctaaagcgggtcctgaacaccccccctcggggcattggcccggccacctgg
gccagggtgcagctcctcgcccaggagaaggggcttcctccctgggaggccctgaaggag
gcggcgaggacctcttcccgcgtcgagccccttaggcatttcgtcgccttggtggaggag
ctccaggacctggtcttcggccccgccgaggccttcttccgccacctcctcgaggccacc
gactaccccacctacctccgggaggcctaccccgaggacgccgaggaccgcctggaaaac
gtggaggagctcctaagggcggccaaggaggcggaggacctgcaggacttcctggacaag
gtggccctcaccgccaaggcggaggagcccgccgaggcggaaggaaaggtcgccctcatg
accctgcacaacgccaaggggctggagttccccgtggtcttcctcgtgggggtggaggag
gggcttttgccccaccgcaactctttaagcaccctcgagggcctggaggaggagcgccgc
ctcttctacgtgggcatcacccgggcccaggaaaggctctacctctcccacgccgaggag
cgggaggtctacggcaggcgggagcccgcccggccgagccgctttctggaggaggtggag
gaggggctatatgaggtgtacgacccctaccgcgtccccaaacccgcccctccgccccac
cgcccaaggcccggggccttccggggcggggagcgggtggtccacccccggttcggcccc
ggcaccgtggtggcggcccagggggacgaggtcacggtccactttgaagggttcgggctc
aagcgcctttccctcaagtacgcggagcttaggccggcatga
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