Thermus thermophilus JL-18: TtJL18_0921
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Entry
TtJL18_0921 CDS
T02009
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ttl
Thermus thermophilus JL-18
Pathway
ttl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TtJL18_0921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttl03019
]
TtJL18_0921
03016 Transfer RNA biogenesis [BR:
ttl03016
]
TtJL18_0921
Enzymes [BR:
ttl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
TtJL18_0921
Messenger RNA biogenesis [BR:
ttl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TtJL18_0921
Transfer RNA biogenesis [BR:
ttl03016
]
Prokaryotic type
tRNA degradation factors
TtJL18_0921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
PCB_OB
S1_2
Motif
Other DBs
NCBI-ProteinID:
AFH38821
UniProt:
H9ZR61
LinkDB
All DBs
Position
complement(837860..840001)
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AA seq
713 aa
AA seq
DB search
MEGTPNVPQAHRYELTLAGRPLVLETGKYAKQASGSVLVRYADTVVLATAQASETPVEAD
FLPLTVEFEERHYAVGKIPGSFMRREGRPGEKAILSARMTDRPIRPLFPKGFRHEVQIIV
TVLSADQKNPPDILGPIAASAALMLSDIPWEGPIAAVRVGLIGGSFVLNPTLQELEESQL
DLVVAGSKEAILMVEAEAGEVDEETLVQALEFAHKEMQPILELQEAMARELAKPKMAWTP
PESLPEEEKEALYRLALERGLSQVLQTASKGERSRALSEFAERLIAEVLPKGEDGTPDEG
KKPLYESAFDEVVRRELRRLVLEEGKRADGRGPKDLRPIWIEVDVLPRAHGSAVFTRGET
QVLGTVTLGTGRDEQILDDLGIDETEKFLVHYNFPPFSTGEVRRLRGVSRREVGHGNLAK
RALKAVMPKEEDFPYTIRVVGDVLESNGSSSMATVCAGCLALMDAGVPIRAPVAGVAMGL
VWEENRAVILTDILGLEDALGDMDFKVAGTRKGVTALQMDNKVGGLPREVLKEALLQARE
ARLKILDLMETVLPAPRPELKPFAPRILSLKVPVEKIGLVIGPGGKNVRALEELGVEVDI
EEDGTVRIYSSDLNAALEAKKRIEDLTREAKVGEIYEGTVTRITPFGAFISLFPGTEGLL
HISQIAPGRVERVEDHLKVGDVIKVKVHRIDERGKIDLIRPELEGKIPPRRRK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtacacccaacgtcccccaagctcaccgctacgagctcaccctggcggggcgg
cccctcgtcctggagacgggcaagtacgccaagcaggcctcggggtccgtcctggttcgc
tacgccgacaccgtggtcctggccacggcccaagcctcggagacgccggtggaggccgac
ttcctccccctcacggtggagtttgaggaaaggcactacgccgtggggaagatcccggga
agcttcatgcgccgggaggggcgtcctggggagaaggccatcctctccgcccgcatgacg
gaccgccccatcaggcccctcttccctaaggggtttcgccacgaggtccagatcatcgtc
accgtcctctccgccgaccagaagaacccgccggacatcctgggccccatcgcggcgagc
gccgccctcatgctctcggacatcccctgggagggccccatcgccgccgtgcgggtgggc
ctcatcggcgggagcttcgtcctgaaccccaccctgcaggagctggaggaaagccagctg
gacctggtggtggcggggagcaaagaggccatcctcatggtggaggcggaggccggggag
gtggacgaggagaccctggtccaggccctggagttcgcccacaaggagatgcagcccatc
ctggagctccaggaggccatggcccgggaactcgccaaacccaagatggcctggaccccc
ccggaaagcctccccgaggaggagaaggaggccctctaccgcctggccctggagcggggg
ctttcccaggtcctgcagacggcgagcaagggggaaaggagccgggccctttcggagttc
gccgaacgcctcatcgccgaggtcctccccaagggggaggacggcaccccggacgagggc
aagaaacccctctacgagagcgcctttgacgaggtggtgcgcagggagcttaggaggctc
gtcctcgaggagggcaagcgggcggacggccgcgggcccaaggacctcaggcccatctgg
attgaggtggacgtcctgccccgggcccacggctccgccgtcttcacccggggcgaaacc
caggtcctgggcaccgtcaccctgggcacgggccgggacgagcagatcctggacgacctg
ggcatagacgagaccgagaagttcctcgtccactacaacttcccccccttctccaccggg
gaggtacggcggctaaggggggtttcccgccgcgaggtggggcacggaaatttggccaag
cgggccctcaaggcggtgatgcccaaggaggaggacttcccctacaccatccgcgtggtg
ggggacgtcctggagtccaacggcagtagctccatggccacggtctgcgccggctgcctc
gccctcatggacgcgggcgtgcccatccgggccccggtggctggggtggccatgggcttg
gtgtgggaggagaaccgggcggtgatcctcacggacatcctgggcctcgaggacgccctc
ggcgacatggacttcaaggtggccgggacccgcaagggggtcaccgccttgcagatggac
aacaaggtggggggccttccccgcgaggtcctgaaggaggccctcctccaggcccgggag
gccaggctcaagatcctggacctgatggagaccgtcctccccgccccccggcccgagctc
aagcccttcgccccccggatcctctccctcaaggtccccgtggagaagatcgggctcgtc
atcggccccgggggcaagaacgtgcgcgccctggaggagcttggggtggaggtggacatt
gaggaggacgggacggtccgcatctactccagcgaccttaacgccgcccttgaggcgaag
aagcgcatagaggacctcacccgcgaggccaaggtgggcgagatctacgagggcaccgtc
acccgcatcacccccttcggcgccttcatcagcctcttccccggcaccgaggggcttctc
cacatcagccagatcgccccgggccgcgtggagcgggtggaggaccacctcaaggtgggg
gacgtgatcaaggtcaaggtccaccgcattgacgagcggggcaagattgacctgatccgc
cccgagctggaaggcaagatcccccccaggcggcgcaagtag
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