Thermus thermophilus JL-18: TtJL18_1005
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Entry
TtJL18_1005 CDS
T02009
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ttl
Thermus thermophilus JL-18
Pathway
ttl03030
DNA replication
ttl03410
Base excision repair
ttl03420
Nucleotide excision repair
ttl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ttl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TtJL18_1005
03410 Base excision repair
TtJL18_1005
03420 Nucleotide excision repair
TtJL18_1005
03440 Homologous recombination
TtJL18_1005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttl03032
]
TtJL18_1005
03400 DNA repair and recombination proteins [BR:
ttl03400
]
TtJL18_1005
Enzymes [BR:
ttl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TtJL18_1005
DNA replication proteins [BR:
ttl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TtJL18_1005
DNA repair and recombination proteins [BR:
ttl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TtJL18_1005
NER (nucleotide excision repair)
GGR (global genome repair) factors
TtJL18_1005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
Taq-exonuc
5_3_exonuc
HHH_5
TraI_hel_assoc_N
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AFH38904
UniProt:
H9ZRE4
LinkDB
All DBs
Position
complement(920384..922879)
Genome browser
AA seq
831 aa
AA seq
DB search
MLPLFEPKGRVLLVDGHHLAYRTFFALKGLTTSRGEPVQAVYGFAKSLLKALKEDGYKAV
FVVFDAKAPSFRHEAYEAYKAGRAPTPEDFPRQLALIKELVDLLGFTRLEVQGYEADDVL
ATLAKKAEKEGYEVRILTADRDLYQLVSDRVAVLHPEGHLITPEWLWEKYGLRPEQWVDF
RALVGDPSDNLPGVKGIGEKTALKLLKEWGSLENLLKNLDRVKPENVREKIKAHLEDLRL
SLELSRVRTDLPLEVDLAQGREPDREGLRAFLERLEFGSLLHEFGLLEAPAPLEEAPWPP
PEGAFVGFVLSRPEPMWAELKALAACKEGRVHRAADPLAGLKDLKEVRGLLAKDLAVLAL
REGLDLAPSDDPMLLAYLLDPSNTTPEGVARRYGGEWTEDAAHRALLSERLHRNLLKRLE
GEEKLLWLYHEVEKPLSRVLAHMEATGVRLDVAYLQALSLELAEEIRRLEEEVFRLAGHP
FNLNSRDQLERVLFDELRLPALGKTQKTGKRSTSAAVLEALREAHPIVEKILQHRELTKL
KNTYVDPLPSLVHPSTGRLHTRFNQTATATGRLSSSDPNLQNIPVRTPLGQRIRRAFVAE
AGWALVALDYSQIELRVLAHLSGDENLIRVFQEGKDIHTQTASWMFGVPPEAVDPLMRRA
AKTVNFGVLYGMSAHRLSQELAIPYEEAVAFIERYFQSFPKVRAWIEKTLEEGRKRGYVE
TLFGRRRYVPDLNARVKSVREAAERMAFNMPVQGTAADLMKLAMVKLFPRLPEVGARMLL
QVHDELLLEAPKERAEEAAALAKEVMEGVWPLAVPLEVEVGIGEDWLSAKG
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgctctttgaacccaaaggccgggtcctcctggtggacggccaccacctggcc
taccgcaccttcttcgccctgaagggcctcaccacgagccggggcgaaccggtgcaggcg
gtctacggcttcgccaagagcctcctcaaggccctgaaggaggacgggtacaaggccgtc
ttcgtggtctttgacgccaaggccccctccttccgccacgaggcctacgaggcctacaag
gcggggagggccccgacccccgaggacttcccccggcagctcgccctcatcaaggaactg
gtggacctcctggggtttacccgcctcgaggtccaaggctacgaggcggacgacgtcctc
gccaccctggccaagaaggcggaaaaagaagggtacgaggtgcgcatcctcaccgccgac
cgggacctctaccagctcgtctccgaccgcgtcgccgtcctccaccccgagggccacctc
atcaccccggagtggctttgggagaagtacggcctcaggccggagcagtgggtggacttc
cgcgccctcgtgggggacccctccgacaacctccccggggtcaagggcatcggggagaag
accgccctcaagctcctcaaggagtggggaagcctggaaaatctcctcaagaacctggat
cgggtaaagccggaaaacgtccgggagaagatcaaggcccacctggaagacctcaggctc
tccttggagctctcccgggtgcgcaccgacctccccctggaggtggacctcgcccagggg
cgggagcccgaccgggaagggcttagggccttcctggagaggctggagttcggcagcctc
ctccatgagttcggcctcctggaggcccccgcccccctggaggaggccccctggcccccg
ccggaaggggccttcgtgggcttcgtcctctcccgccccgagcccatgtgggcggagctt
aaagccctggccgcctgcaaggagggccgggtgcaccgggcagcggaccccttggcgggg
ctaaaggacctcaaggaggtccgaggcctcctcgccaaggacctcgccgttttggccctt
cgcgaggggctggacctcgcgccttcggacgaccccatgctcctcgcctacctcctggac
ccctccaacaccacccccgagggggtggcccggcgctacgggggggagtggacggaggac
gccgcccaccgggccctcctctcggagaggctccatcggaacctccttaagcgcctcgag
ggggaggagaagctcctttggctctaccacgaggtggaaaagcccctctcccgggtcctg
gcccacatggaggccaccggggtacggctggacgtggcctacctgcaggccctttccctg
gagcttgcggaggagatccgccgcctcgaggaggaggtcttccgcttggcgggccacccc
ttcaacctcaactcccgggaccagctggagagggtgctctttgacgagcttaggcttccc
gccttggggaagacgcaaaagacgggcaagcgctccaccagcgccgcggtgctggaggcc
ctacgggaggcccaccccatcgtggagaagatcctccagcaccgggagctcaccaagctc
aagaacacctacgtggaccccctcccaagcctcgtccacccgagtacgggccgcctccac
acccgcttcaaccagacggccacggccacggggaggcttagtagctccgaccccaacctg
cagaacatccccgtccgcacccccttgggccagaggatccgccgggccttcgtggccgag
gcgggttgggcgttggtggccctggactatagccagatagagctccgcgtcctcgcccac
ctctccggggacgagaacctgatcagggtcttccaggaggggaaggacatccacacccag
accgcaagctggatgttcggcgtccccccggaggccgtggaccccctgatgcgccgggcg
gccaagacggtgaacttcggcgtcctctacggcatgtccgcccataggctctcccaggag
cttgccatcccctacgaggaggcggtggcctttatagagcgctacttccaaagcttcccc
aaggtgcgggcctggatagaaaagaccctggaggaggggaggaagcggggctacgtggaa
accctcttcggaagaaggcgctacgtgcccgacctcaacgcccgggtgaagagcgtcagg
gaggccgcggagcgcatggccttcaacatgcccgtccagggcaccgccgccgacctgatg
aagctcgccatggtgaagctctttcctaggcttcccgaggtgggggcgaggatgctcctc
caggtccacgacgagcttcttctcgaggcgcccaaggagcgggcggaggaggcggcggcc
ctggccaaggaggtcatggagggggtctggcccctggcggtgcccctggaggtggaggtg
ggcatcggggaggactggctttccgccaagggctga
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