Thermus thermophilus JL-18: TtJL18_1213
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Entry
TtJL18_1213 CDS
T02009
Name
(GenBank) apurinic endonuclease APN1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ttl
Thermus thermophilus JL-18
Pathway
ttl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ttl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TtJL18_1213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttl03400
]
TtJL18_1213
Enzymes [BR:
ttl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
TtJL18_1213
DNA repair and recombination proteins [BR:
ttl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
TtJL18_1213
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AFH39105
UniProt:
H9ZRZ5
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All DBs
Position
1117590..1118402
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AA seq
270 aa
AA seq
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MPRYGFHLSIAGKKGVAGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREA
SGGLPAVIHASYLVNLGAEGELWEKSVASLADDLEKAALLGVEYVVVHPGSGRPERVKEG
ALKALRLAGVRSRPVLLVENTAGGGEKVGARFEELAWLVADTPLQVCLDTCHAYAAGYDV
AEDPLGVLDALDRAVGLERVPVVHLNDSVGGLGSRVDHHAHLLQGKIGEGLKRVFLDPRL
KDRVFILETPRGPEEDAWNLRVLRAWLEEA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgctacgggttccacctttccatcgccgggaaaaagggcgtggccggggcggtg
gaggaagccaccgccctcggcctcaccgctttccagatcttcgccaaaagcccgcggagc
tggcgcccaagggccctctccccggccgaggtggaggccttccgcgccttaagggaggcc
tctgggggcctccccgccgtgatccacgcctcctacctggtcaacctgggggcggagggg
gagctttgggagaagagcgtggcgagcctggcggacgacctggaaaaggccgccctcctc
ggggtggagtacgtggtcgtccaccccggctcgggccgccccgagcgggtcaaggaaggg
gccctcaaggccctgcgcctcgccggcgtccgctcccgccccgtcctcctcgtggagaac
accgccgggggcggggagaaggtgggggcgcggtttgaggagctcgcctggcttgtggcg
gacacccccctccaggtctgcctggacacctgccacgcctacgccgccgggtacgacgtg
gccgaggaccccttgggggtccttgacgccctggaccgggccgtgggcctggagcgggtc
cccgtggtccacctcaacgactccgtgggcggcctcggaagccgcgtggaccaccacgcc
cacctcctccagggaaagatcggggaggggctcaagcgcgtcttcttggacccgaggctc
aaggaccgggtcttcatcctggaaacccccaggggaccggaggaggacgcctggaacctc
cgggtccttagggcctggctcgaggaggcctaa
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