Thermus thermophilus JL-18: TtJL18_1904
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Entry
TtJL18_1904 CDS
T02009
Name
(GenBank) formamidopyrimidine-DNA glycosylase Fpg
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ttl
Thermus thermophilus JL-18
Pathway
ttl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ttl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TtJL18_1904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttl03400
]
TtJL18_1904
Enzymes [BR:
ttl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
TtJL18_1904
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TtJL18_1904
DNA repair and recombination proteins [BR:
ttl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TtJL18_1904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
DUF7573
NFACT_N
Zn_ribbon_Nudix
Zn_ribbon_6
Zn_Ribbon_TF
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AFH39765
UniProt:
H9ZTV5
LinkDB
All DBs
Position
1759868..1760671
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AA seq
267 aa
AA seq
DB search
MPELPEVETTRRRLRPLVLGQTLRQVVHHDPARYRNTALAEGRRILEVDRRGKFLLFALE
GGVELVAHLGMTGGFRLEPTPHTRAALVLEGRTLYFHDPRRFGRLLGVRRGDYREIPLLL
RLGPEPLSEAFAFPGFFRGLKESARPLKALLLDQRLAAGVGNIYADEALFRARLSPFRPA
RSLTEEEARRLHRALREVLAEAVELGGSTLSDQSYRQPDGLPGGFQAHHAVYGREGLPCP
ACGRPVERRVVAGRGTHFCPTCQGEGP
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagcttcccgaggtggagaccacccgtaggcggctgcgccccctggtcctgggc
cagacccttaggcaggtggtccaccacgaccccgcccgctaccggaacacggccctggcg
gaggggaggcggatcctggaggtggaccgccgggggaagttcctcctcttcgccctcgag
ggcggggtggagctcgtggcccacctggggatgacgggggggttccggctggagcccacg
ccccacacccgggcggccctggtcctcgagggccggaccctctacttccacgacccccgg
cgcttcgggcgcctcttgggggtgcggcgcggggactaccgggagatccccctcctcctc
cgcctcggccccgagcccctctcggaggccttcgcctttcccgggttcttccgggggctg
aaggagagcgcgaggccccttaaggccctcctcctggaccagcgcctcgccgccggggtg
ggcaacatctacgccgacgaggccctcttccgcgcccgcctaagccccttccgccccgcc
cgaagcctcaccgaggaggaggcgcggcgcctccaccgggccctgcgcgaggtgctggcg
gaggccgtggaactcgggggaagcaccctctcggaccaaagctaccgccagcccgacggc
ctccccgggggcttccaggcgcaccacgccgtctacggccgggagggcctcccctgcccg
gcctgcgggcgcccggtggagcggcgggtggtggccgggcggggcacccacttctgcccc
acctgccagggggaaggcccctag
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