Thermus thermophilus JL-18: TtJL18_1911
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Entry
TtJL18_1911 CDS
T02009
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ttl
Thermus thermophilus JL-18
Pathway
ttl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ttl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TtJL18_1911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttl03021
]
TtJL18_1911
03400 DNA repair and recombination proteins [BR:
ttl03400
]
TtJL18_1911
Enzymes [BR:
ttl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TtJL18_1911
Transcription machinery [BR:
ttl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TtJL18_1911
DNA repair and recombination proteins [BR:
ttl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TtJL18_1911
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
AFH39772
UniProt:
H9ZTW2
LinkDB
All DBs
Position
complement(1769652..1773011)
Genome browser
AA seq
1119 aa
AA seq
DB search
MEIKRFGRIREVIPLPPLTEIQVESYRRALQADVPPEKRENVGIQAAFRETFPIEEEDKG
KGGLVLDFLEYRLGEPPFPQDECREKDLTYQAPLYARLQLIHKDTGLIKEDEVFLGHIPL
MTEDGSFIINGADRVIVSQIHRSPGVYFTPDPARPGRYIASIIPLPKRGPWIDLEVEPNG
VVSMKVNKRKFPLVLLLRVLGYDQETLARELGAYGELVQGLMDESVFAMRPEEALVRLFT
LLRPGDPPKRDKAVAYVYGLIADPRRYDLGEAGRYKAEEKLGIRLSGRTLARFEDGEFKD
EVFLPTLRYLFALTAGVPGHEVDDIDHLGNRRIRTVGELMTDQFRVGLARLARGVRERML
MGSEDSLTPAKLVNSRPLEAAIREFFSRSQLSQFKDETNPLSSLRHKRRISALGPGGLTR
ERAGFDVRDVHRTHYGRICPVETPEGANIGLITSLAAYARVDELGFIRTPYRRVVGGVVT
DEVVYMTATEEDRYTIAQANTPLEGNRIAAERVVARRKGEPVIVSPEEVEFMDVSPKQVF
SVNTNLIPFLEHDDANRALMGSNMQTQAVPLIRAQAPVVMTGLEERVVRDSLAALYAEED
GEVAKVDGNRIVVRYEDGRLVEYPLRRFYRSNQGTALDQRPRVVVGQRVRKGDLLADGPA
SENGFLALGQNVLVAIMPFDGYNFEDAIVISEELLKRDFYTSIHIERYEIEARDTKLGPE
RITRDIPHLSEAALRDLDEEGVVRIGAEVKPGDILVGRTSFKGESEPTPEERLLRSIFGE
KARDVKDTSLRVPPGEGGIVVRTVRLRRGDPGVELKPGVREVVRVYVAQKRKLQVGDKLA
NRHGNKGVVAKILPVEDMPHLPDGTPVDVILNPLGVPSRMNLGQILETHLGLAGYFLGQR
YISPIFDGAKEPEIKELLAQAFEVYFGKRKGEGFGVDKREVEVLRRAEKLGLVTPGKPPE
EQLKELFLQGKVVLYDGRTGEPIEGPIVVGQMFIMKLYHMVEDKMHARSTGPYSLITQQP
LGGKAQFGGQRFGEMEVWALEAYGAAHTLQEMLTLKSDDIEGRNAAYEAIIKGEDVPEPS
VPESFRVLVKELQALALDVQTLDEKDNPVDIFEGLASKR
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggagatcaagcggttcggtcgcatccgagaggttatcccccttccacccctcaccgag
atccaggtggagtcctaccgcagggccctgcaggccgacgtccccccggagaagcgggag
aacgtcggcatccaggcagccttccgggagaccttccccattgaggaggaggacaagggc
aagggcggtctggtgctggacttcctggagtaccgcctgggcgagccccccttcccccag
gacgagtgccgggagaaggacctcacctaccaggcccccctctacgcccggctccagctc
atccacaaggacacgggcctcatcaaggaggacgaggtcttcctggggcacatccccctg
atgaccgaggacggctccttcatcatcaacggggccgaccgggtcatcgtctcccagatc
caccgctcccccggggtctacttcacccccgaccccgcccggcccgggcgctacatcgcc
agcatcatccccctgcccaagcggggcccctggattgacctggaggtggagccgaacggc
gtcgtctccatgaaggtcaacaagcggaagttccccctggtcctcctccttcgggtcctg
gggtacgaccaggagaccctggcccgggagcttggggcctacggggagctggtccagggc
ctcatggacgagagcgtcttcgccatgcgccccgaggaggccctggtccgcctcttcacc
ctcctccgccccggggacccgcccaagcgggacaaggccgtggcctacgtctacggcctc
atcgccgaccccaggcggtacgacctgggcgaggccgggcggtacaaggcggaggagaag
ctggggatccgcctctcgggccgcaccctggcccgctttgaggacggggagttcaaggac
gaggtcttcctccccaccctccgctacctcttcgccctcaccgccggggtcccgggccac
gaggtggacgacattgaccacctgggcaaccgccgcatccgcaccgtgggggagctcatg
accgaccagttccgggtggggctcgcccgcctcgcccggggggtgcgggagcggatgctc
atgggctcggaggacagcctcaccccggccaagctggtgaacagccgccccttggaggcc
gccatccgggagtttttcagccgcagccagctttcccagttcaaggacgagaccaacccc
ctctcctccctgcgccacaagcggcggatctccgccctgggcccgggtggcctcacccgg
gagcgggcggggtttgacgtgcgcgacgtccaccgcacccactacgggcgcatctgcccc
gtggagacccccgagggcgccaacatcggcctcatcacctccttggcggcctacgcccgg
gtggacgagctgggcttcatccgcaccccctaccgccgggtggtgggcggggtggtcacc
gacgaggtggtctacatgacggccaccgaggaggaccgctacaccatcgcccaggccaac
acccccctggaggggaaccggatcgcggccgagcgggtggtggcccggaggaagggggag
cccgtgatcgtgagcccggaagaggtggagttcatggacgtctcccccaagcaggtcttc
tccgtgaacaccaacctcattcccttcctggagcacgacgacgccaaccgggccctcatg
ggctccaacatgcagacccaggccgtgcccctcatccgggcccaggcccccgtggtgatg
acgggcctcgaggagcgggtggtgcgggactccttggccgccctctacgccgaggaggac
ggggaggtggccaaggtggacggcaaccgcatcgtcgtgcgctacgaggacggccgcctg
gtggagtaccccttgcgccgcttctaccgctccaaccagggtacggccctggaccagcgc
ccccgggtggtggtggggcagcgggtgcgcaaaggggacctcctcgccgacggccccgcc
tccgagaacggcttcctggccctggggcagaacgtcctcgtggccatcatgccctttgac
gggtacaactttgaggacgccatcgtcatcagcgaggagctcctcaagcgggacttctac
acctccatccacattgagcgctacgagattgaggcccgggacaccaagctcggccccgag
cggatcacccgggacatcccccacctctccgaggccgccctaagggacctggacgaggag
ggcgtggtgcgcatcggcgccgaggtgaagcccggggacatcctcgtggggcggaccagc
ttcaagggcgagtccgagcccacccccgaggagaggctcctccgctctatcttcggcgag
aaggcccgggacgtgaaggacacctccctccgggtgccgcccggcgaaggggggatcgtg
gtccgcaccgtccggctgcggcggggcgaccccggggtggagctcaagcccggggtgcgg
gaggtggtccgggtctacgtggcccagaagcgcaagctccaggtgggggacaagctcgcc
aaccgccacgggaacaagggggtggtggccaagatcctccccgtggaggacatgccccac
ctgcccgacggcactcccgtggacgtgatcctgaaccccctgggcgtccccagccggatg
aacctggggcagatcctggagacccacctgggcctcgccggctacttcctgggccagcgc
tacatctcccccatctttgacggggccaaggagcccgagatcaaggagctcctcgcccag
gcctttgaggtttacttcggcaagcgcaagggcgagggcttcggcgtggacaagcgggag
gtggaggtcctccgccgggcggagaagctcggcctcgtgaccccgggcaagcccccggag
gagcagcttaaggagctcttcctccagggcaaggtggtcctctacgacggccgcacgggc
gagcccattgagggccccatcgtggtggggcagatgttcatcatgaagctctaccacatg
gtggaggacaagatgcacgcccgctccacgggcccctactccctcatcacccagcagccc
ctgggcgggaaggcccagttcggcggccagcgcttcggggagatggaggtctgggccctc
gaggcctacggggcggcccacaccctccaggagatgctcaccctcaagtccgacgacatc
gagggcaggaacgccgcctacgaggccatcatcaagggggaggacgttcccgagcccagc
gtccccgagtccttccgcgtgctggtgaaggagctccaggccctggccttggacgtgcag
accctggacgagaaggacaaccccgtggacatctttgaggggttggcttccaagcggtga
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