Thermus thermophilus JL-18: TtJL18_1915
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Entry
TtJL18_1915 CDS
T02009
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ttl
Thermus thermophilus JL-18
Pathway
ttl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TtJL18_1915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttl03019
]
TtJL18_1915
Messenger RNA biogenesis [BR:
ttl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TtJL18_1915
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
HDOD
ATP-synt_B
DUF1664
DUF5662
KhpA-B_KH
Propep_M14
KH_2
Motif
Other DBs
NCBI-ProteinID:
AFH39776
UniProt:
H9ZTW6
LinkDB
All DBs
Position
complement(1775326..1777050)
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AA seq
574 aa
AA seq
DB search
MSLLDLVLLLLVLGLGGVLLLRRKGEDRSAQEARELLEAARREAREVLEAARKEARDILE
AARQEAKALRQEAEVRAKAQREEVEAELRRRLEAAEAEAKKRLEEAGERLKAEREELRAE
RERLKSLQEELKEERERLKAEREELRREGERLAKRAEALDARAARLEETEAELVRKEEAL
KAEARALEERLKEVERRLYEVAGLTPEEARRLVLERLDRELEEEKAQRVRAALERARLEA
RREAQKILAQAMQRQASETAAQLAVTVVPIPSDAMKGRIIGREGRNIRAFEALTGVDLII
DDTPDAVLLSSFNPIRREIARMALEELLKDGRIHPSRIEEVVEKAKQEMKTFIYERGEEA
ALEAGVVGLKPGLIQLLGRLHFRSSYGQNVLKHSIQVAHLAGIMAAELGLDAALARRAGL
LHDIGKSVDREVEGSHVEIGIALARRFGEPKEVVDAIAHHHDPDNAETLYAVLVAAADAL
SAARPGARRESLEEYLQRLEALERIALSFPGVETAFAVQAGREVRVIVKPEKISDAKATL
LAREIASRIEKEMNYPGQVQVTVVRETRAVEYAR
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttctggacctggttcttctgctcctggtcctggggcttgggggggttctcctc
ctcaggcggaagggggaggaccgctcggcccaggaggcccgggagctcctggaggcggcg
aggcgggaggcccgggaggtcctggaggccgcgcggaaggaggcccgggacatcctggag
gccgcccgccaggaggccaaggccctgcgccaggaggcggaggtccgggccaaggcccag
cgggaggaggtggaggcggagctcaggcgccgcctcgaggccgccgaggccgaggccaag
aagcgcctggaggaggcgggggaacgccttaaggcggagcgggaggagcttcgcgccgag
cgggagcgcctaaagtccctccaagaggagctcaaggaggagcgggagcgcctcaaggcg
gagcgggaggagctccgccgggagggggagcggctcgccaagcgggccgaggccctggac
gccagggcggcgcggctggaggagacggaggcggagcttgtccgcaaggaggaggcgctc
aaggcggaggccagggccctggaggagcggcttaaggaggtggagcggaggctctacgag
gtggcgggcctcacccccgaggaggcccgcaggctcgtcctggagcgcctggaccgggag
ctggaggaggagaaggcccagagggtgcgggccgccttggagcgggcccgcctcgaggcc
cggcgggaggcgcagaagatcctggcccaggccatgcagcgccaagcctcggagaccgcg
gcccagctcgccgtcaccgtggtgcccatcccctccgacgccatgaaggggcggatcatc
ggccgggaggggcggaacatccgcgcctttgaggccctgacgggggtggacctcatcatt
gacgacaccccggacgccgtcctcctctcctccttcaaccccatccgccgtgagatcgcc
cgcatggccttggaggagcttttgaaggacggccgcatccacccgagccgcattgaggag
gtggtggagaaggccaagcaggagatgaagaccttcatctacgagcggggggaggaggcg
gccttggaggcgggggtggtgggcctgaagcccggcctcatccagcttttgggccggctc
cacttccgctccagctatggccagaacgttctcaagcactccatccaggtggcccacctc
gccgggatcatggcggcggagctcggcctggacgctgccctcgcccggagggccgggctc
ctccacgacatcggcaagagcgtggaccgggaggtggagggaagccacgtggagatcggc
atcgccctggcgcggcgcttcggggagcccaaggaggtggtggacgccatcgcccaccac
cacgaccccgataacgccgagaccctctacgccgttttggtggccgcggccgacgccctc
tcggcggcgcggcccggggcgaggcgggagagcctcgaggagtacctccagcgcctggag
gccctggagcgcatcgccctctccttccccggggtggagacggccttcgccgtgcaggcg
ggccgggaggtgcgggtcatcgtcaagccggagaagatcagcgacgccaaggccaccctc
ctggcccgggagatcgcgagccgcattgagaaggagatgaactacccgggccaggtccag
gtgaccgtggtgcgggagacccgggcggtggagtacgctaggtga
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