Thermus thermophilus JL-18: TtJL18_2153
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Entry
TtJL18_2153 CDS
T02009
Name
(GenBank) putative hydrolase of the metallo-beta-lactamase superfamily
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ttl
Thermus thermophilus JL-18
Pathway
ttl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TtJL18_2153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttl03019
]
TtJL18_2153
Messenger RNA biogenesis [BR:
ttl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TtJL18_2153
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B
Lactamase_B_2
RMMBL
Motif
Other DBs
NCBI-ProteinID:
AFH39992
UniProt:
H9ZUI2
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All DBs
Position
pTTJL1801:complement(103705..105294)
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AA seq
529 aa
AA seq
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MRRLDLGRLSVWLFGGLGEIGGNQVLLYTEEGGLLLDFGRPFGRWGAYFTEFLSPRTSGL
GLRDLLFLRLLPPVPGLYRDGTGDTLLPTELERELLGGLPLDGGKVLALLLSHAHLDHTG
SVGYLRQDLPVVTTAATAAIVKAMQDTAQVGVDGEAAYLSPRLPRGDTGLLEGDRKRYLR
RPYRLWGRLQAFPHRSPAVQKTLEGHPWEEASSPLALGPFRVEALPVDHSVPGAAAFAVD
TPEGLVVYTGDLRRHGRWGAKTEAFLRGLEGREVFLLLVEGTRLGEPGRARTEEEVRQAL
HAEVARWEGAPVVVDFAPRNLERLLSALEVAQEVGRRLVVTAKDAYLLWGLAEAEPDPWE
RVLGEVLVLKEDKNRTSGWERALWDEAPVQGVSPEEVAQDLGAYLLALGFYEVNRLLDLR
LLERKAGRVPRRGAYIFSNSYWADQEQILDLKVLLRWLEALDLRLLPEDLAALPQDPQGV
RNPFHTSGHAPEADLREVAERLRPRYLLPIHTERPERWREFYEGEVLLL
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcgccggttggacctgggcaggctctccgtctggctcttcgggggcctgggggagatc
gggggaaaccaggttctcctttacacggaggagggagggctcctcctggacttcggccgg
cccttcggccgctggggggcctacttcacggagttcctctccccccgcacctcgggcctt
gggcttcgagacctcctcttcctccggcttctgccccctgtccccggcctctaccgggac
gggacgggggacaccctcctgccgacggagctggagcgggagctgctgggggggcttccc
ctggacggggggaaggttctggccctcctcctctcccacgcccacctggaccacaccggg
tccgtgggctacctgcggcaggaccttcccgtggtgaccacggcggccaccgccgccatc
gtcaaggccatgcaggacaccgcccaggtgggcgtggacggggaggcggcctacctcagc
cccaggctccccaggggggacacggggctcctggaaggggaccgcaagcgctacctccgc
cggccctaccggctttggggacgcctccaggcctttccccaccgctcccccgccgtccag
aagaccctggagggccacccttgggaggaggcctcctcccccctcgccctggggcccttc
cgggtggaggcccttcccgtggaccactccgtccccggggccgcggccttcgccgtggac
acccccgaggggcttgtggtctacacgggggacctgcggcgccacggccgctggggcgcc
aagacggaggccttcctccggggcctggaggggcgggaggtcttcctcctcctggtggag
gggacgcggctcggggagccggggcgggcccgcacggaggaggaggtgaggcaggccctc
cacgccgaggtggcccggtgggagggggccccggtggtggtggacttcgccccccgcaac
ctggagcggctcctctccgccctggaggtggcccaggaggtggggcggaggctcgtggtc
accgccaaggacgcctatctcctctgggggttggcggaggcggaaccggacccctgggag
agggtcctcggcgaggtcctggtccttaaggaggacaagaaccggacctcgggctgggag
cgggccctctgggacgaagccccggtccagggagtctccccggaggaggtggcgcaggac
ctgggggcctacctcctggccctgggcttctacgaggtgaaccgcctcctggacctgcgg
cttctggagaggaaggcggggagggtcccgaggcggggggcctacatcttcagcaactcc
tactgggccgaccaggagcagatcctggacctcaaggtcctcctccgctggctggaggcc
ctggacctccgcctcctccccgaggacctggccgcccttccccaggacccccagggggtg
cgcaaccccttccacacctccggccacgctcccgaggcggacctccgggaagtggcggag
cgcctgcggcctcgctacctcctgcccatccacacggagcggcccgagcggtggcgggag
ttctacgagggggaggtcttgctcctatga
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