Thermoanaerobacterium thermosaccharolyticum DSM 571: Tthe_0132
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Entry
Tthe_0132 CDS
T01299
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ttm
Thermoanaerobacterium thermosaccharolyticum DSM 571
Pathway
ttm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tthe_0132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttm03019
]
Tthe_0132
03009 Ribosome biogenesis [BR:
ttm03009
]
Tthe_0132
Enzymes [BR:
ttm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Tthe_0132
Messenger RNA biogenesis [BR:
ttm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Tthe_0132
Ribosome biogenesis [BR:
ttm03009
]
Prokaryotic type
rRNA helicases
Tthe_0132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Ins_allergen_rp
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ADL67720
UniProt:
D9TNY2
LinkDB
All DBs
Position
134289..135833
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AA seq
514 aa
AA seq
DB search
MDFKELNLNEKILKAIDDMGFEEPSKIQSEVIPVLLQGSDVIGQAETGTGKTLAYGAPII
NNIGSNEGKVFCLVLTPTRELAIQVNDELARIGKYSKVRLLPVYGGVQIDRQIKAIKRGV
DIIIGTPGRVLDLIKRDILRLNDVKYLVLDEADEMLDMGFIDDIKEIINHTNKERQTMMF
SATMPDEIKNLAKKYMKSDAKFISIVKKTMTVSTVQHFYYEVKNQERFESLCRILDVEEP
SSTIIFCKTKKEVDELTENMQSRGYNVEGMHGDMSQNQRINTLRKFKEGNLDFLVATDVA
ARGIDIENLTHVINYNLPQDVESYVHRIGRTGRANRSGVAYTLVTSREYPALKRIERETK
CKIRRKELPTIDDIFQVKYNKMIKDIKRVLENDGYKRFVPLAMELDEEYNLVDVAAALMD
MYYGKELYYNDDEPKYVRLFINLGRKDKLNRRTLLKLLMDIGDISKEDIGTIDIFDKFTF
IDASRNAAKNIINNSFDKIIDGKRIKIEISKPKN
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggattttaaggaactaaatttaaatgaaaaaattttaaaagctatcgatgatatggga
tttgaagagccatctaaaatacagtcggaagtaatacctgtgttgttgcagggctcagat
gtaataggacaggcagagacaggaaccggcaagacgctggcgtacggtgcacctatcata
aacaatattggttcaaatgaggggaaagtgttttgccttgttttgactcctacaagagag
ttggcaatacaagtaaatgatgaattggcccgcattggaaagtattctaaagtgagattg
cttcctgtctatggtggcgtgcaaatagataggcagattaaagcaataaaaagaggcgta
gatataataattggcactcccggcagagttctggaccttattaagagggatatattgaga
ttgaacgatgtgaagtaccttgttttagatgaagcagatgaaatgctggatatggggttt
atagacgatattaaagaaatcataaaccatacaaataaagaaagacagacaatgatgttt
tctgccacgatgccggatgaaataaagaatcttgcaaagaaatacatgaaaagcgatgca
aaatttatttctatcgtaaaaaagactatgaccgtttcaacagtccagcatttttattac
gaggtgaaaaaccaagaaaggtttgaatctctttgcagaatattagatgttgaagagccg
tcaagcacgataattttctgcaagacaaaaaaggaagttgatgagcttacagaaaatatg
cagtcgagaggatacaatgttgaaggtatgcacggcgatatgagccaaaatcaaaggata
aatactttaaggaaatttaaagaaggcaaccttgatttcttggttgctacagatgtagca
gcaagaggtattgatattgaaaatttgacgcacgtcataaattataatctgccacaggat
gtggaatcatatgtccataggattggaaggacaggtagggcaaatagaagcggcgtcgct
tatacattagtgacatcaagggagtatccagcattaaagaggatagaaagagagacaaaa
tgcaaaataagaagaaaagaattgcctacaattgatgatatttttcaagttaaatacaat
aaaatgattaaagatataaaaagggttttagaaaatgatggctacaagagatttgtgccg
cttgcaatggaacttgatgaagagtacaaccttgtagatgttgcagcagctttaatggat
atgtactatgggaaagaattatattataacgacgatgaacctaaatacgtaaggctgttc
attaatttagggcggaaagataaactaaatcggaggacacttctgaaattattaatggac
ataggtgatatttctaaagaagacattggcactatagatatatttgataaatttactttc
atagatgccagtagaaatgctgcaaaaaatataataaataattcttttgataaaattatc
gatgggaaaagaataaaaatagaaatttcaaagcctaaaaattaa
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