Thermoanaerobacterium thermosaccharolyticum DSM 571: Tthe_0626
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Entry
Tthe_0626 CDS
T01299
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
ttm
Thermoanaerobacterium thermosaccharolyticum DSM 571
Pathway
ttm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ttm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Tthe_0626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttm03400
]
Tthe_0626
DNA repair and recombination proteins [BR:
ttm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tthe_0626
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Tthe_0626
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
Microtub_bd
DUF87
DUF8810
AAA_22
EAD9
Motif
Other DBs
NCBI-ProteinID:
ADL68187
UniProt:
D9TT45
LinkDB
All DBs
Position
626149..628134
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AA seq
661 aa
AA seq
DB search
MSEFKLVSDYRPTGDQPEAIKKLTEGVNMGLKCQTLLGVTGSGKTYTMANIIKNVNKPTL
VIAHNKTLAAQLCSEFKEFFPENAVEYFVSYYDYYQPEAYVPQTDTYIEKDASINEEIDK
LRHSATAALFERRDVIIVASVSCIYGLGDPEDYEDLMLSLRPGMVKDRDEILKKLVDIHY
ERNDINFVRGKFRVRGDVIEVFPASSSEKAIRIELFGDEIDRITEIDVLTGEIVGERNHV
AIFPASHYATSKEKLKRAIESIEKELEERYKELKDQGKILEAERLKQRTNYDIEMLQEVG
YCSGIENYSRHISGRPAGSPPYTLLDYFPDDFLMFIDESHVTIPQIRGMYNGDRARKESL
VDFGFRLPSAFDNRPLKFEEFEERINQLICVSATPGPYELEHSERVVEQIIRPTGLVDPE
VKVKPVKGQVDDLLSEIKMTVEKGYRVLVTTLTKKMAEDLTDYFNDMGVKVKYLHSDIET
IERMEIIRDLRLGKFDVLIGINLLREGLDIPEVALVAILDADKEGFLRSETSLIQTIGRA
ARNAEGRVIMYADTVTESMKNAINETNRRRAIQMDYNKKHGITPKTIVKGIRDVIEATKV
AEDKVPYSIKEAEVVDRVSIEKMISELEKEMRKAAKELEFEKAAKLRDRIFELQKMIKNA
I
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaattcaaacttgtctctgactacaggccaacgggtgatcaaccagaagcaata
aaaaaattgacggaaggcgtcaatatggggcttaagtgccagacattacttggtgttact
ggatctggaaaaacatacacaatggcaaatattattaaaaatgttaataaacctacactt
gtcatagcccataataagactttagcggcgcagctttgctcagaatttaaagaattcttt
ccggaaaatgccgttgaatactttgtaagttactatgactattaccagcctgaagcgtat
gttccacagactgatacgtatatagagaaagatgcatctatcaatgaggaaattgataaa
ctaaggcactccgcaacggcggctctttttgaaaggagagacgtcataattgttgccagt
gtttcgtgcatatacggccttggcgatccagaagattatgaagacttgatgctttcattg
agaccaggcatggtaaaagacagagacgaaatcttaaaaaaattggttgatatacattac
gagagaaatgacatcaattttgtcagaggtaagtttagagtcagaggagatgtcattgaa
gtttttcctgcatcatcatcagaaaaagctattaggatagagctttttggagatgagata
gataggattaccgaaatagatgtattgactggagaaatagttggagagaggaatcatgtg
gctatttttccagcatctcattatgcaacgtcaaaagagaaattaaaaagggcaatagaa
agcatagaaaaagaattggaagaaaggtataaagaactaaaagatcagggtaaaattttg
gaagcagagagacttaaacagaggacgaattatgacatagaaatgcttcaagaagtaggc
tattgttctggaattgagaattattcaaggcacatttcaggaaggcctgctggaagcccc
ccatatacgttactagattattttcctgatgattttttgatgtttattgatgaatcacat
gtcacaatacctcagattagagggatgtacaatggggatagagcgagaaaggaatctctt
gtggattttggatttaggttgccgtcagcatttgacaacaggcctttaaaatttgaagaa
tttgaagagaggataaatcagcttatatgtgtatctgcaacacctggaccttatgagctg
gagcattctgaaagggttgttgagcaaatcatacgtcctacaggattagtagatcctgaa
gttaaagttaagcctgttaaaggacaggtagatgatcttttaagtgagattaaaatgaca
gtagagaaaggttatcgcgtattagtgacgacgttgactaagaaaatggcggaagacttg
acagactatttcaatgacatgggtgtgaaagtgaagtatctccattcagatattgagaca
attgagaggatggaaataataagggatttgaggctaggaaaatttgatgtcctaattgga
ataaatctgctgagggaaggtcttgatataccagaagtagcattggttgccattcttgat
gctgataaagagggctttttgcgttctgaaacttcgcttatacaaactataggtcgagct
gctagaaacgcagaaggaagagttatcatgtacgctgatacagtgacagaatctatgaaa
aacgcaataaacgaaaccaatagaagaagagccatacagatggattacaataaaaagcac
ggtatcaccccaaagacaattgtaaaagggataagagatgtaatagaagcaacaaaggta
gctgaggataaagttccatatagtataaaggaggcagaagtagtagacagggtatctatt
gaaaaaatgataagtgaacttgaaaaagaaatgagaaaagctgccaaggaactggaattt
gaaaaagctgctaaactcagggacagaatatttgaacttcaaaagatgattaaaaatgct
atataa
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