Thermoanaerobacterium thermosaccharolyticum DSM 571: Tthe_2145
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Entry
Tthe_2145 CDS
T01299
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
ttm
Thermoanaerobacterium thermosaccharolyticum DSM 571
Pathway
ttm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ttm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tthe_2145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttm03400
]
Tthe_2145
Enzymes [BR:
ttm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Tthe_2145
DNA repair and recombination proteins [BR:
ttm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Tthe_2145
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
ADL69622
UniProt:
D9TRM5
LinkDB
All DBs
Position
complement(2139013..2139924)
Genome browser
AA seq
303 aa
AA seq
DB search
MWVRRMRYLVEMSGSKVIVHGIKDFNLKETLECGQCFRWNEEDDGSYTGVAFDRVINVKL
DGDILTIDNTTLADFNDIWYDYFDLGRDYGKIKEALSQDEILRAAIKYGEGIRILRQDTW
ETLISFIISQNNRIPQIKKVIENLSRAFGHPIVYKNKTYYTFPKVQDIIMADEESLNNSK
CGFRSKYIIDAALKVFNDEINLFELQLYDTHEVRNILMSIRGVGPKVADCVILYSIGRYE
AFPTDVWIKRVVEFLYLKRKTNNADVQSFAKEKFGDLSGFAQQYLFNYAKDHVSKDIFRE
RKN
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgaggagaatgagatatttagtagaaatgtccggttctaaggttatagtgcat
ggaatcaaggattttaaccttaaagagacattagaatgtggacaatgtttcagatggaat
gaagaagatgatggaagttatacgggggttgcgtttgacagggtaataaatgtaaaatta
gatggagatatattgacgattgataataccactttggcagattttaatgatatatggtat
gactattttgacttagggagagactatggaaaaatcaaagaagccctttcgcaagatgaa
atcttaagagcggctataaagtacggtgaaggtataaggattttaagacaggatacgtgg
gagacactcatatccttcataatatctcaaaataacagaatacctcagataaaaaaagtc
atagaaaatttaagcagggcatttgggcatcctatcgtatataaaaataagacttattat
acatttccaaaagtgcaggacataataatggcagatgaagaatcattaaataacagcaag
tgcggatttagatcaaagtatataattgatgcggctttaaaagtatttaatgacgaaatc
aatctttttgagctgcagctttacgatacacacgaagtaagaaatatacttatgagcata
agaggagttgggcctaaagttgcagactgtgtaattctttattcaatcggaagatatgaa
gcatttccaacagatgtgtggataaagcgcgttgttgagtttttataccttaaaagaaag
acaaataatgcagatgtacaaagttttgccaaagagaagtttggagatttgtctggtttt
gctcagcagtatctatttaactatgcaaaagaccatgtttcaaaagatatatttagagag
aggaaaaattaa
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