Thermoproteus tenax: TTX_1041
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Entry
TTX_1041 CDS
T01641
Symbol
cdc48
Name
(GenBank) cell division cycle protein, AAA family
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ttn
Thermoproteus tenax
Pathway
ttn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ttn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
TTX_1041 (cdc48)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttn03019
]
TTX_1041 (cdc48)
03009 Ribosome biogenesis [BR:
ttn03009
]
TTX_1041 (cdc48)
04131 Membrane trafficking [BR:
ttn04131
]
TTX_1041 (cdc48)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ttn04147
]
TTX_1041 (cdc48)
Messenger RNA biogenesis [BR:
ttn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
TTX_1041 (cdc48)
Ribosome biogenesis [BR:
ttn03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
TTX_1041 (cdc48)
Membrane trafficking [BR:
ttn04131
]
SNARE
SNARE associated proteins
Others
TTX_1041 (cdc48)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
TTX_1041 (cdc48)
Exosome [BR:
ttn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TTX_1041 (cdc48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_14
AAA_5
AAA_22
AAA_33
TIP49
Vps4_C
AAA_24
nSTAND3
IstB_IS21
RNA_helicase
AAA_28
AAA_18
Mg_chelatase
ATPase_2
AAA_25
TsaE
NACHT
AAA_17
NPHP3_N
MazE_antitoxin
DUF815
Sigma54_activat
NB-ARC
AAA_7
ABC_tran
ATPase
AAA_3
Bac_DnaA
Parvo_NS1
HEPN_SAV_6107
Motif
Other DBs
NCBI-ProteinID:
CCC81686
UniProt:
G4RQ40
LinkDB
All DBs
Position
complement(898544..900892)
Genome browser
AA seq
782 aa
AA seq
DB search
MRLPLKNSSPPLAQSRRRDEESFYRQGRAMSMADEVILRIYEAKSRDVGRSIVRIPIRVM
KKLGVEPGDYVEIVGRKTAYAQVWPAYPEDEDKDIIRMDGMIRQNAGVGIGDTVKVRRVS
LKPAQRVVLAPTEPVRVDPEYLKKQILLGKPVTRGQAIDVPFYGGSIRFVVVQVQPGPAA
YVSVDTDVAVREEPVKETELAIPRVTWEDIGDLEEAKQKIRELVELPLRHPELFKHLGIE
PPKGILLYGPPGVGKTLLAKAVANEANAYFIAINGPEIMSKYYGESEAKLREIFEEAKKN
APAIIFIDEIDAIAPKREEVTGEVEKRVVAQLLTLMDGLQERGQIVVIGATNRPDAVDPA
LRRPGRFDREIQIPMPDKRARREILQVHTRNMPLCTSDDVKLGLCAKGDEVDLDRIAEMT
HGYTGADIAALAKEAAMSALRKAVAKGLVDLDQETIPPEVLNKLKVGMSDFMEAMKFVQP
TVLREVIIEVPEVRWDDIGGYDNIKQELREIVEWPMKYRPYFDELGIEPPKGILLYGPPG
VGKTMFAKAVATESGANFIAVRGPEILSKWVGESEKAVREIFKRARMAAPCVVFFDEIDS
IAPARGSRLGDSGVTDRIVNQMLAEMDGIGALKNVVVMAATNRPDILDPALLRPGRFDRI
IYVPPPDEKARLEIFKVHTKRVKLCDTSAVKEGRCKKEEVVDLEELAKRTEGYTGADIAA
LVREAAMLALRETIRERASGARPVSRQHFEEALKRIPPSLTKEDIKMYEEVSKRMRRAIV
GL
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgagacttcctcttaaaaactcatctccgccattggcgcagagtcgccggcgcgatgaa
gaaagcttttatagacaggggagggccatgagcatggccgatgaggtcattctgcgcata
tacgaagcgaagtcccgcgacgttgggcgctcgatagttaggataccgataagagtcatg
aagaagctcggcgtagagccgggcgactacgttgagatcgtggggcgcaagacggcctat
gcgcaagtgtggccggcctatcctgaggacgaggacaaagacataatacgcatggacggc
atgataaggcagaacgctggcgtgggcataggggatacggtcaaagtgaggagggtctcg
ctgaagccagcccaaagggtagtcttggcccctacggagcccgtcagagtagacccggag
tacctcaagaagcagatccttctgggcaagcctgtgacgcgcggacaggccatagacgtg
cccttctatggcggctccataaggtttgtagtagttcaagtgcaaccaggcccggcggcc
tacgtgtcggttgacaccgacgtggctgtaagggaggagcccgtcaaggagaccgagctg
gccatccctcgcgtcacttgggaggacatcggcgatctggaggaggcgaaacagaagata
agggagctagtggagctcccgctgaggcaccccgagctgttcaaacatctgggcatagag
ccgcccaaggggatactcttgtacgggcctccgggcgtgggcaagaccctcctcgccaag
gcggtggccaacgaggccaacgcgtacttcatagccataaacggccccgagataatgtcc
aaatactacggcgagtccgaggccaagctgagggagatattcgaggaggccaagaagaac
gccccggccataatcttcatagacgagatagacgccatagccccaaagagggaggaggtg
acgggggaggtcgagaagagggtcgtggcccagctgttgactctgatggacggtctgcag
gagagggggcagatagtcgtaataggcgcgacgaataggcccgacgccgtggacccggcg
ttgaggaggcccgggaggttcgacagagagatccagataccgatgccggacaagagagct
aggcgcgagatactccaagtccacacgaggaacatgccgttgtgcacaagcgatgacgtc
aaattaggtctctgcgccaagggcgatgaggtagacctagatagaatcgccgagatgacc
cacggctacactggggccgacatagccgccttggccaaggaggcggccatgtctgcgttg
aggaaggctgtggctaagggattggtagacctagaccaagagacaataccgcccgaggtg
ctcaacaaactcaaggtgggtatgtcggacttcatggaggcgatgaagttcgtacaaccc
accgtcttaagggaagtgatcatagaggtgcccgaggttcgttgggacgacataggcggc
tacgacaacataaaacaggagctgagggagatcgttgagtggcccatgaagtatagaccc
tatttcgacgagctcggcatagagccgcccaaggggatactcttgtacgggcctccgggc
gtgggcaagaccatgttcgccaaggcggtggcaacagagtcgggcgccaacttcatcgcc
gtgagggggcccgagatcctctccaagtgggtcggcgaatcggagaaggcggttagggag
atcttcaagagggccaggatggctgctccatgcgtagtcttcttcgacgagatagactct
attgctccagcccgcggctcccgcctaggcgactctggcgtaactgacagaatcgtgaac
cagatgctggcggagatggacggaataggcgctctgaagaacgtagtagtcatggcggcc
acaaaccggcccgacatcttggatccagccctgttgaggccaggccgcttcgaccgtata
atctacgtcccgccgcccgacgaaaaggcgaggttggagatcttcaaagtgcacaccaag
agagttaaattatgcgatacatcggccgtgaaggagggcagatgtaagaaggaggaggta
gtcgatctggaggagctggccaagaggaccgagggctacactggcgccgacatagcggcg
cttgtgcgcgaggccgccatgttggctctgagggagacaataagagagagggccagcggc
gccaggccggtgtcacgtcaacacttcgaggaggcgctcaagaggataccgccgtcgttg
actaaggaggatataaagatgtacgaggaggtgtcgaaaaggatgaggagggctatcgtt
gggctctag
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