Thermoproteus tenax: TTX_1449
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Entry
TTX_1449 CDS
T01641
Name
(GenBank) XPD/Rad3-related DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ttn
Thermoproteus tenax
Pathway
ttn03022
Basal transcription factors
ttn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ttn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TTX_1449
09124 Replication and repair
03420 Nucleotide excision repair
TTX_1449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttn03021
]
TTX_1449
03036 Chromosome and associated proteins [BR:
ttn03036
]
TTX_1449
03400 DNA repair and recombination proteins [BR:
ttn03400
]
TTX_1449
Enzymes [BR:
ttn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TTX_1449
Transcription machinery [BR:
ttn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TTX_1449
Chromosome and associated proteins [BR:
ttn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
TTX_1449
DNA repair and recombination proteins [BR:
ttn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TTX_1449
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
nSTAND_NTPase5
AAA_25
PhoH
YuaX
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CCC82078
UniProt:
G4RKI3
LinkDB
All DBs
Position
complement(1278629..1280398)
Genome browser
AA seq
589 aa
AA seq
DB search
MERFFSYDQFRPFQRELAVAILEGFRSGKVVVANAPTGLGKTAAALAAALAYAQESGARV
LYLVRVKNEMLQPLRELSRLKSKGVELKVAFLRNKQDMCCYRELRGLPYAEFLAECRYLR
ALGKCQYYPPKPLELRTPLTPKAFIKAACEAGTCAYETAKVLTMEAQVVVATYFYVFSPR
AEQWVDLGKSVLIVDEAHSLPDAVASINSVEITEADIRRARSDAERYGLSDVAAMLYRAA
KSLREIRPGPLSIGDVLALFDEPGSLERSALEVIKRMIDEGLTPYSPIVSIAEFVKTLKS
SGRYVVVAETSEDGLKLRAVPYDVNRLIANVINAAKAVALISGSLPIDLFLKALPTTRPT
ATFDVPLDRFVKSGNFIAIIDKGVTTKFTSRGEEMYKAIAKRLAAVITETPGGILVVFPS
YDVLKGVRKYLSFKIPLYVEARDTDLEDIPLEEKFAVFAVAGGKLAEGVEYVKEGRNLLA
AVAVVGVPFPDRDYFLDKRVEELTPTLGAEAAWSAVYLYNAVIKVRQAVGRLFRSPDDRG
ALIFLDYRYLEPELYLNLKDILRGAQLAEGEEELRKYLREFFATESLAL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
gtggagcgttttttctcctacgatcagttcaggccattccaacgagagttagcggtggcc
attctagagggatttagatcaggtaaagtggttgtggccaacgcgcccactgggttgggt
aagactgcagcagcgctcgcggccgccttggcttatgcgcaggagagcggggccagggtg
ctctatcttgtcagagtgaagaacgagatgcttcagcctctcagagagctatcgaggctt
aagtccaaaggggttgagctgaaagtcgccttcctcagaaataaacaagatatgtgttgt
tacagggagctcagaggcttgccctacgcagagtttttagctgagtgtagatatcttagg
gctttgggcaaatgtcaatactatccgccgaagcccctagagctacggacgccgctgact
cccaaggcgtttattaaggcggcgtgtgaggccggcacttgtgcgtacgagacggccaaa
gtgttgactatggaggcgcaagtggttgtagcgacatatttctacgtcttcagccccagg
gctgaacagtgggtcgacttgggcaaaagcgtgttgatagtcgacgaggcccactctttg
cccgacgcggtggcctctataaactccgtcgagataaccgaggccgatataaggagggcg
agatctgacgcagaacggtacggcctaagcgatgtggcggccatgttgtatagagccgcc
aagagcctccgtgagataaggcccggcccgttgtcgatcggagacgtgttagctctgttt
gatgagccggggagcctcgagaggtctgccttggaggtaatcaagaggatgatcgacgag
ggtttaacgccttactcgcccatagtatctatagcggagttcgtcaagacgttgaagagc
agcggcagatacgtagtagtggccgagacctcagaggatggacttaagctgagggctgtg
ccctacgatgttaacagattaatagccaatgtgataaacgcggccaaggccgtggcgctc
atcagcggatctctgccgatagatctatttcttaaggccctgcccacaactaggccgacg
gcgaccttcgatgtaccgctcgatagatttgtcaagagcggtaacttcattgctataata
gacaagggggttactactaagttcacgtcgaggggagaggagatgtacaaggcaatagcc
aagaggttggccgcagttataacggagacgcctggaggcatcctcgtcgtatttcccagc
tacgacgtgttaaaaggcgtgaggaagtatttgtcgttcaagatacctctctatgtcgag
gccagagacacagacttggaggacataccgttggaggagaagtttgcggtcttcgccgtg
gccggcgggaagttggccgagggcgttgagtacgtcaaggaggggagaaaccttctggcc
gccgtagctgtggtcggagtgccgtttcccgatagagattacttcttggacaagagggtc
gaagagcttactcctacgctcggagccgaggccgcgtggagcgctgtatatctctataac
gcagttataaaggtgagacaagcggtaggtcggctgtttaggtcgccggatgacagaggc
gccctcatcttcctggactatagatatctggagccggagctctacctaaacctcaaggac
atattgaggggggcccagttggccgagggcgaggaggagttgaggaaatatctcagagag
ttttttgctacagaaagcctcgctctttag
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