Thermoanaerobacterium thermosaccharolyticum M0795: Thethe_00126
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Entry
Thethe_00126 CDS
T02407
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tto
Thermoanaerobacterium thermosaccharolyticum M0795
Pathway
tto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Thethe_00126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tto03019
]
Thethe_00126
03009 Ribosome biogenesis [BR:
tto03009
]
Thethe_00126
Enzymes [BR:
tto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Thethe_00126
Messenger RNA biogenesis [BR:
tto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Thethe_00126
Ribosome biogenesis [BR:
tto03009
]
Prokaryotic type
rRNA helicases
Thethe_00126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AGB17865
UniProt:
L0IEA5
LinkDB
All DBs
Position
118482..120026
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AA seq
514 aa
AA seq
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MDFKELNLNEKILKAIDDMGFEEPSKIQSEVIPVLLEGSDVIGQAETGTGKTLAYGAPII
NSFGSNDGKVFCLILTPTRELAIQINDELARIGKYSKVRLLPVYGGVQIDRQIKAIKRGV
DIVVGTPGRVLDLIKRNVLDLKSVKYLVIDEADEMLDMGFIDDIKEIINHTNEERQTMMF
SATMPDEIKSLAKKYMKSDAKFISIVKKTMTVSTVQHFYYEVKNQERFESLCKILDVDEP
SSTIIFCKTKKEVDELTENMQSRGYNVEGMHGDMSQNQRINTLRKFKEGILDFLVATDVA
ARGIDIENVTHVINYNLPQDVESYVHRIGRTGRANRSGVAYTLVTSREYPALKRIEKATR
CKIKRKELPTVDDILEVKYNKMIAEIKKTLEKNDYKRFVPLAMELDEEYNLVDVAAALMD
MYYGKELYYNDDEPKYVRLFINLGRKDKLNKRTLLKLLMDIGDISKEDIGNIDIFDKFTF
IDASKNAAKNIVNNSFDKIIDGKRIKIELSKPKD
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggattttaaggaactaaatttaaacgaaaaaattttaaaagctatcgacgatatgggc
tttgaggagccgtctaaaatacagtcggaagtaatacctgttttattagaagggtcagat
gtaataggacaggcagagacaggaactggcaagacgctggcgtacggcgcacctattata
aacagttttggttcaaatgatgggaaagtgttttgccttattttgactcccacaagagag
ctggcaatacaaatcaatgatgaattggctcgcattggaaagtattctaaagtgagattg
cttcctgtttatggtggtgtgcaaatagataggcagattaaagcaataaaaaggggtgta
gatatcgttgtaggtacgcctggaagagttttggaccttataaagaggaatgtgcttgat
ttaaagagtgtaaagtaccttgtcatagatgaagcagatgaaatgctggatatggggttt
atagacgatatcaaagaaatcataaaccatacaaatgaagaaagacagacaatgatgttt
tctgccacgatgccagatgaaataaaaagtcttgcaaaaaaatacatgaaaagcgatgcg
aaattcatttctatcgtaaaaaagactatgaccgtttcaacagttcagcatttttattac
gaggtaaaaaaccaagaaaggtttgagtctctttgcaaaatattagatgttgatgagccg
tcaagtacgataattttctgcaaaacaaaaaaagaagttgatgagcttacagaaaatatg
cagtcaagaggatacaatgttgagggaatgcatggcgatatgagccaaaatcaaaggata
aatacgcttaggaaatttaaagaaggtattttagatttcttagtggcgactgatgtagct
gcaagagggatagatattgaaaatgtgacacatgtcataaattacaatctgccacaagat
gtagaatcatacgttcacagaattggcaggacaggaagggcaaatcgaagcggtgtcgct
tatacattagtgacatcaagggaatatccagcattaaagaggatagaaaaagccacaaga
tgtaaaataaagcgaaaagaactgccgacggtggatgacatactggaagtcaagtacaat
aaaatgatagctgaaattaaaaaaacattggagaaaaatgattacaagagatttgtacca
ttggcaatggagcttgacgaagaatacaaccttgtagatgttgcagcggctttaatggat
atgtactatgggaaagaattatattataacgacgacgaacctaaatatgtaaggctgttt
attaatttaggaaggaaagacaaactaaataaaaggacacttctaaaattattaatggac
ataggtgatatttctaaagaagatattggcaacatagatatatttgataaatttactttc
atagatgccagtaaaaatgctgcaaaaaatatagtaaataattcttttgacaaaatcatc
gatggtaaaagaataaaaatcgaactttcgaagcctaaagattaa
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