Thermoanaerobacterium thermosaccharolyticum M0795: Thethe_00375
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Entry
Thethe_00375 CDS
T02407
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tto
Thermoanaerobacterium thermosaccharolyticum M0795
Pathway
tto03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tto00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Thethe_00375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tto03021
]
Thethe_00375
03400 DNA repair and recombination proteins [BR:
tto03400
]
Thethe_00375
Enzymes [BR:
tto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Thethe_00375
Transcription machinery [BR:
tto03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Thethe_00375
DNA repair and recombination proteins [BR:
tto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Thethe_00375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AGB18102
UniProt:
L0IJD3
LinkDB
All DBs
Position
374357..377911
Genome browser
AA seq
1184 aa
AA seq
DB search
MFELKNFDSMKIGLASPEKIREWSRGEVKKPETINYRTLKPEREGLFCEKIFGPTKDWEC
HCGKYKRVRYKGVICDRCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLILDM
SPRALEKVLYFASYVVIDPGETNLSKKQLLSEKEYREYLDKYGNKFKAGMGAESIKELLQ
EIDLEKLSKELKAEIRESTGQKRVRAIRRLEVVQAFLDSGNKPEWMILDVIPVIPPDLRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVRNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLYQCGLPKE
MALELFKPFVMKRLVDKGIAQHIKSAKRMVEKVRPEVWDVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPVLVEGRAIKLHPLVCTAYNADFDGDQMAVHVPLTVEAQAEARFLMLAANNIL
KPQDGKPVMTPTQDMVLGCYYLTGDEDGVKGEGRIFKDYEEALMAYQLGQINIHAKIKVR
MKREVNGEIKSKIIETTIGKLIFNSAIPQDLGFVDRTNPDTMFDLEISTLVDKSKLGKIL
DRVYRVHGPTKTAETLDKIKALGYKYSTKAALTVSVSDMVIPEEKKTLLNEADEAVKKID
AQFRRGLISEEERYESVIRTWNMTTEKVSDALMANLDKFNPIFMMAHSGARGSKNQIKQL
AGMRGLMANPAGRIIELPIRSNFREGLNVLEFFISTHGARKGLADTALRTADSGYLTRRL
VDVSQDVIIREDDCGTDEGIYVSEIKEGNEVIERLCDRLSGRVSLEDIKDPNTGEVIVKK
NTMISEQDAEKIEELGIKRVKIRSLLTCKSKHGVCRMCYGRNLATGSQVEIGEAVGIIAA
QAIGEPGTQLTMRTFHTGGVAGADITQGLPRVEELFEARKPKGLAVISEIPGIVKINETK
KKREVVITDNENNISKTYLIPYGSRLKVQDGQYIEAGDELTEGSVNPHDILKIKGLFAVQ
TYLLQEVQKVYRLQGVEINDKHIEVIIRQMMRKIKVEDSGDTSMMPGELVDMFAFEEENR
KVQEKGLRPATGTRALLGITKAALATDSFLSAASFQETTRVLTDAAIKGKVDPLIGLKEN
VIIGKLIPAGTGLSRYRNIVVKSIDEVGNEVSEAEDNNAEVNVK
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgagcttaaaaatttcgattcaatgaaaataggacttgcttcaccagaaaagatt
agagaatggtcaagaggtgaagtaaaaaagcctgaaactataaactataggacattaaaa
cctgagagagaaggattgttttgcgaaaaaatatttggacctactaaagattgggaatgc
cattgtggtaaatataaaagagtaaggtacaaaggtgttatatgtgacagatgtggcgtt
gaagtaacgagatcaaaagttaggcgtgaaaggatgggacatattgagcttgctgcccct
gtttcacatatatggtatttcaaagggatacctagccgtatgggattaatacttgacatg
tcaccaagagcacttgaaaaagttttgtattttgcatcatatgttgtgattgatcctggt
gaaacaaatctatctaaaaagcagcttctaagcgagaaggaataccgcgaataccttgat
aaatatggaaataagtttaaagccgggatgggtgctgaatcaataaaggaacttttacag
gagatagaccttgaaaaattatcaaaggaattaaaagctgaaatcagggaatctactggt
caaaaacgcgttagagcaataagaagacttgaagttgtgcaggcatttttggattctggg
aataaacctgagtggatgatattagacgtcatacctgttattccacctgatttaagacca
atggttcaactagatggtggacgatttgcgacatcggatttaaatgatctttatagaagg
gttataaatagaaataacaggttaaagaggttgcttgatttaggtgcaccggatattata
gttagaaatgaaaaaagaatgcttcaggaagctgtagacgcactcatagacaatggcagg
agaggaagaccagtaacgggtccaggcaataggccacttaagtcattgtcagacatgcta
aaaggaaaacaagggagatttaggcaaaaccttctaggtaagagggttgactattctgga
cgttctgttattgtcgtaggacctgaacttaagctttaccaatgcggtcttcctaaagaa
atggctcttgagctttttaaaccatttgtcatgaaaaggcttgttgataaaggaattgca
cagcatataaaaagcgcaaagagaatggttgagaaagtgcgcccggaagtgtgggacgtt
ttggaagatgtcataaaggagcaccccgttctattgaacagagcacctacattgcaccgt
ttaggtattcaggcatttgagcctgtattggtcgaaggcagagccataaagttgcatcca
ttggtatgtacggcttataatgccgactttgacggtgatcagatggctgttcacgttcca
ttgactgttgaggcacaggcagaggcaagattcttgatgttggctgctaacaacatatta
aagcctcaggatggaaaacctgttatgacacctacacaggatatggttcttggatgttac
tatttaacaggtgatgaagacggcgtcaagggtgaaggcagaatatttaaagattatgaa
gaagcattgatggcgtatcaattaggtcaaataaatattcatgctaagataaaagtaagg
atgaaaagagaagtcaatggcgagattaagtccaaaatcatagagactactattggaaag
ctcatatttaattctgctatacctcaggatttgggctttgtggacaggacaaatcctgat
accatgtttgatttagaaatatcaactcttgttgacaaatcaaaattgggaaaaatatta
gatagagtgtacagggtgcatggtccaacaaagacagctgagacgctggataaaatcaaa
gcattaggttataaatattctacaaaggctgcattaactgtcagtgtatctgatatggtt
atacctgaagagaagaagactcttttaaatgaagcggatgaagcagtgaagaagatagat
gcccagtttaggcgtggtcttatttcagaagaagagagatatgaaagcgtaattagaact
tggaacatgacgacagaaaaagtaagcgatgctctgatggccaacctagataaatttaat
cctatatttatgatggctcattcaggtgctagaggtagtaaaaaccaaataaagcagcta
gccggtatgagaggcttgatggcaaatcctgcaggtaggataatcgaacttcctataaga
tccaactttagagagggcctcaatgtgctagaattctttatatctactcatggtgcaaga
aagggtttggctgatacggccttgaggaccgctgactcaggttacttgacccgtaggctt
gtggatgtaagtcaagatgtgattatcagagaagatgattgcggaacagatgaaggaata
tatgtaagcgagattaaagaaggaaatgaagtaatagaaaggctttgtgacaggttaagc
ggaagggtatcgttagaagatataaaagatcctaatactggtgaagtaatagtaaagaaa
aatacaatgatatcagagcaagatgctgaaaagatagaggagttaggaattaagagagtt
aaaataagatcacttctaacatgtaaatcgaaacatggcgtttgcaggatgtgctacggt
aggaacttagccactggttcacaagtcgaaattggtgaggctgtcggcataattgcagca
caagctattggcgagcctggtacacagcttaccatgagaacattccacaccggtggtgtt
gctggtgccgatattacacaaggtttaccgagagtcgaagagctttttgaagcaaggaaa
ccgaaggggttagctgtgatttctgaaataccaggtatcgtaaaaataaatgagacgaaa
aagaagagggaagtcgtaattacagataacgaaaataatatttcaaagacatatctcata
ccttatggatcgaggttaaaagttcaggatggacaatacattgaagcgggcgatgaacta
acagaagggtctgtaaatccgcatgatattttgaagataaaaggtctgtttgcggttcag
acgtatttgctacaagaggttcaaaaagtatacagactacaaggtgttgaaataaatgac
aaacatattgaagttataatcaggcagatgatgaggaagattaaagttgaggattctgga
gatacatcaatgatgcctggtgagcttgtggatatgtttgcttttgaagaagaaaacagg
aaggttcaggaaaaaggattgaggccagctactggcactagggcacttttaggtattaca
aaagctgcactggcaacagattcattcttatctgctgcatctttccaagagactacaagg
gttttgactgatgccgcaataaaaggaaaagttgatccacttattggtttaaaggaaaat
gttattataggtaaattgataccagcagggactggtttatcaaggtatagaaacatagtt
gtaaaatccatcgatgaagtaggcaatgaggtcagtgaggcagaagataataatgcagaa
gttaatgtaaaataa
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integrated database retrieval system
