Thermoanaerobacterium thermosaccharolyticum M0795: Thethe_00591
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Entry
Thethe_00591 CDS
T02407
Name
(GenBank) putative exonuclease of the beta-lactamase fold involved in RNA processing
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
tto
Thermoanaerobacterium thermosaccharolyticum M0795
Brite
KEGG Orthology (KO) [BR:
tto00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Thethe_00591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tto03021
]
Thethe_00591
03019 Messenger RNA biogenesis [BR:
tto03019
]
Thethe_00591
Transcription machinery [BR:
tto03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
Thethe_00591
Messenger RNA biogenesis [BR:
tto03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
Thethe_00591
U7-dependent histone pre-mRNA processing factors
Thethe_00591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_6
Lactamase_B_3
ODP
Beta-Casp
Motif
Other DBs
NCBI-ProteinID:
AGB18282
UniProt:
L0IJZ8
LinkDB
All DBs
Position
577287..579155
Genome browser
AA seq
622 aa
AA seq
DB search
MDAYKYIFKQKNLVSDLDRDIYSYLILWQIKVEIYLDIIDDAKEHFLNIFDNITLSYNNI
ILFIECVLLLDEFEMSLKKDGIYNQLMNYDGENIWINLYIFMLSLKNKRRNYSIKDELLY
MVEKDVDRFFLSLLHTILAEIYKDEGDEKWKSELKKAKELNHHNLRMTRLEIQWGIKNDD
DLKKGKYYRFYPDNKDILKKYYEIYKNEIQQNNDFKLFKFNLLEGGSTGGSSYLITYDDV
NILLDCGINLKDGKAYYNDFKKLGLDIKDIDLLVVTHCHLDHCGGIVNLIKNGLNCPIIM
SHETLHILNGIFSENGNMQDLNINVKDYKLLNIINDKTLTDYCYDAVIKDKKVSLNLIPS
GHILGACGVYIDIDGFSVFYTGDFTVKDVETNVGLCIPDGMNADVLITEATFGYTSSFSV
YDKKIQDQLILEMLSDLTDHGVAFVPAFAVGKAQDLLLLLRRTFNYTPYNVYVDGALSYI
TMLYEKVKGAIYGNGILNANDIKLYDSKREFIKKEIALGNCLVMTSSDNLTEGSTSFIYG
RELMSLDNAILLNISNNIKKPISMIQENIPIINHGIIQDIIEVFLKLAPKKVYIVHRGAK
SNKSFNIEEVLSWFEGVDAVAP
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgtataaatatatttttaaacagaaaaatcttgtaagtgaccttgatagagat
atttattcatatcttatattgtggcagataaaagttgaaatatatttggatattattgat
gatgcgaaagagcattttttaaatatatttgataatataactttatcttacaataatata
attttatttattgaatgtgtgcttttactagatgagtttgaaatgtcgttaaaaaaagac
ggcatttacaaccaattgatgaattatgatggtgaaaacatctggataaatttatatatt
tttatgttaagtttgaaaaataaaagaaggaattattcaattaaggacgaactactatat
atggtggaaaaagatgttgatagattttttctgtcattgctacataccatattggcagag
atatacaaagatgaaggagacgaaaaatggaaaagtgaattgaagaaggcaaaagagttg
aatcatcacaatttaagaatgactaggctggagatacagtggggtattaaaaatgatgat
gatttaaagaaaggtaagtactacagattctatccagacaataaagatattttaaagaag
tattatgaaatatataaaaatgaaatccagcaaaataatgattttaagttgtttaaattt
aatttattggaaggaggaagtacaggtggaagtagttacttaataacgtacgatgacgtt
aacatattattagattgtggtattaatcttaaagatgggaaagcatattacaatgacttt
aaaaaactcggtttggatatcaaagatattgacttgctggttgttactcattgccattta
gatcactgtggaggcattgtaaaccttataaaaaatggattaaattgccctataatcatg
tctcatgagacgttgcatatattaaatggcattttttcagaaaacggcaatatgcaggac
ttaaatataaatgtaaaggattataagttattaaatataatcaatgataagactttaact
gattattgctacgatgctgtaataaaagataaaaaagtttctttgaaccttattccatct
ggtcatattttgggagcttgtggagtgtatatcgacatagatggattttctgtattctat
acaggcgattttacagtaaaagatgtggaaacaaatgttgggctttgtattcctgatggc
atgaatgcagatgtattaataacagaagccacttttggatatacatctagtttcagtgta
tacgataaaaaaattcaagatcaattgattttagaaatgttgtcggatttgactgatcac
ggcgtggcatttgtacctgcgtttgctgtaggaaaagctcaagatttattgttgctttta
agaaggacttttaattatacgccatataatgtctatgttgatggagcattgtcatatata
acgatgctgtatgaaaaagtgaaaggagctatttacggcaatggcatcttaaatgcaaat
gacataaaattgtatgacagcaaaagggaatttataaaaaaagagatagcgctgggaaat
tgtttggtaatgactagttcggataatcttacagaaggcagtacttcctttatctacggc
agagaattgatgtctttagacaatgcgattttattaaatataagcaacaatataaaaaaa
ccgatatccatgatacaggagaatatcccaattattaatcatgggataatacaagacatt
attgaagtatttttgaaacttgcaccaaaaaaagtttacatcgttcacagaggtgctaaa
tcaaataaatcatttaacatagaagaggtattgagttggtttgaaggcgtagatgcggtg
gcgccgtaa
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