Thermoanaerobacterium thermosaccharolyticum M0795: Thethe_00773
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Entry
Thethe_00773 CDS
T02407
Name
(GenBank) DNA helicase, Rad3
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
tto
Thermoanaerobacterium thermosaccharolyticum M0795
Pathway
tto03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tto00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Thethe_00773
09124 Replication and repair
03420 Nucleotide excision repair
Thethe_00773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tto03021
]
Thethe_00773
03036 Chromosome and associated proteins [BR:
tto03036
]
Thethe_00773
03400 DNA repair and recombination proteins [BR:
tto03400
]
Thethe_00773
Enzymes [BR:
tto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Thethe_00773
Transcription machinery [BR:
tto03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Thethe_00773
Chromosome and associated proteins [BR:
tto03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Thethe_00773
DNA repair and recombination proteins [BR:
tto03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Thethe_00773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
DEAD
PDDEXK_1
ResIII
S-AdoMet_synt_N
Helicase_C
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AGB18456
UniProt:
L0IJP9
LinkDB
All DBs
Position
771588..773927
Genome browser
AA seq
779 aa
AA seq
DB search
MIKEKIKVSVRDLVEFILRSGDLNSEFVGNGNRRALEGARIHRKIQKSKNENYTKEVSLK
YEAEYDDFILAVEGRADGIIIENGNVTIDEIKTTNAQLNDIDDNYNPLHLAQAKCYAYIY
SIQNDLDAINIQLTYYQIDNDEIKYLRYTYSIDELKAFFEDLLKKFYNWAMISYSWINER
NSSIEKIDFPYKNYRKGQRKLAVTVYRTIEREKKLFVQAPTGIGKTISTIFPSIKAMREG
MTSKIFYLTAKTIAGTVADETFKMLRDKGLRIKTLVITAKEKICLNERTECTPESCPYAK
GHYDRINDAIMDMILNEDDFSRAKIEEYAKKHTVCPFEFSLDLSLWSDVVICDYNYVFDP
NVGIKRFFQDKSDFTLLVDEAHNLVDRSREMFSAELFKKEFLSLKKSMQGKSSKIEKVLS
KINSIFLQMKKQCGENNFFVAKEKQVALDGYLRQFIGEAELYLVNNKKSSECDELIDLYF
KSLSYLKISDMYDSSYMTYVEKDGDDVKIKLFCLDPSKLLSQTLQKVRGTIFFSATLLPI
TYYKSLLGGSDEDYAICLDSPFDTKNRMILIADDVSTKYKDRENTREKVAEYIDAVVWKK
PGNYIVYFPSYEYMNMIYEIYKDRGTNMIIKQESSMSEDDKESFLKMFEDEKKGIIAFCV
LGGIFSEGIDLKNNRLIGVIIVGVGLPQICLERDIIKDYFEEKYGLGYEFAYLYPGFNKV
MQSAGRVIRTETDRGVILLIDERFLHKNYIKLFPKEWFPYIKVNKNNIEAYLDGFWRNL
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagagaagataaaagtttcagttagagacttggtagagtttatattgcgcagt
ggtgatttaaacagtgagtttgtcggaaacggcaatagaagagcgctagaaggggcaagg
attcatagaaagatacagaaatcgaaaaatgaaaattatacgaaagaagtctcattaaag
tacgaagcagagtacgatgattttatccttgctgttgaaggccgtgcggatggcatcatt
attgaaaacggcaatgttacgatagatgagataaagactacaaatgctcaactaaatgac
attgatgataattacaatccgctacatttggcacaggcaaaatgctatgcttatatatac
tctattcagaacgatttggatgcgataaatattcaactaacgtattatcagattgataat
gatgagattaaatatttgagatacacgtattctatagatgagctaaaagcattttttgaa
gatcttttaaaaaagttttacaactgggcaatgatatcatacagttggataaatgaaaga
aacagctccatagagaagatagattttccttataaaaattacaggaaaggtcagagaaag
ctagccgtaactgtctacaggacgattgaaagagagaaaaaactctttgtacaagcgcct
accggaataggtaaaactatatctacaatttttccatcgataaaggctatgagggaaggg
atgacgtcaaagatattttacctgacggctaaaacaattgccggtactgttgcagatgag
acgtttaagatgctaagggataaggggctaagaattaagacgcttgttatcactgcaaaa
gagaagatatgtttaaatgaaaggactgaatgcacccctgagtcatgcccatacgcaaaa
ggccattatgataggataaacgatgctataatggatatgattttaaatgaagatgatttt
agtagggcaaaaattgaggagtatgcaaaaaaacatacggtatgtccatttgagttttca
ctagacttatctttatggtcggatgttgtaatctgcgattacaattatgtttttgaccca
aatgtcgggataaaaagattttttcaagataagagcgattttactctacttgtggatgaa
gcccacaaccttgtagacaggtcaagggagatgttttctgcagagctttttaaaaaagag
tttttatcattaaaaaagtcgatgcaagggaaaagcagtaaaatagagaaggtattatcg
aagattaattctatttttcttcaaatgaaaaaacagtgcggtgaaaataatttttttgta
gcgaaagaaaaacaagttgctttggatggctatttaaggcagtttataggtgaagctgaa
ttgtaccttgtaaataataaaaaatcatccgaatgcgatgagcttatagatttgtatttt
aaatcattatcttatttaaaaatttctgatatgtatgattcgtcatatatgacgtacgta
gaaaaagatggtgatgatgtaaaaattaagctattctgcttggatccgtctaaattatta
agtcaaacgcttcagaaagtcagagggacaatatttttttctgccacacttcttccgatt
acatactataagtcgcttttaggagggagcgatgaagattacgcaatttgcttagattca
ccgtttgatactaaaaacagaatgattcttatagcagatgatgtatctacaaagtacaaa
gatagagaaaatacgcgagaaaaagtagcggagtatattgatgcagttgtgtggaaaaag
ccagggaattatattgtgtattttccatcatatgagtatatgaacatgatatatgagatt
tataaagatcgaggaacgaacatgataatcaagcaggagagcagtatgagtgaggatgac
aaagagagttttttaaagatgtttgaagatgagaaaaagggaatcatagccttttgcgtg
ctaggaggcatcttttcagaaggcattgatttgaagaataatagattaatcggcgttata
attgtaggtgtcggtcttcctcaaatatgtcttgaaagagatataataaaagactacttc
gaagaaaagtatgggcttggatatgagtttgcttacctttatcctggctttaataaagtg
atgcaatcagcaggtcgtgttattagaactgagactgatagaggtgttattttgcttata
gatgaaagatttttgcataagaactacataaaattatttcctaaggaatggtttccgtat
attaaagtcaataaaaataatatagaagcatatcttgacggcttttggaggaatttataa
DBGET
integrated database retrieval system
