Thermoanaerobacterium thermosaccharolyticum M0795: Thethe_01393
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Entry
Thethe_01393 CDS
T02407
Name
(GenBank) RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
tto
Thermoanaerobacterium thermosaccharolyticum M0795
Pathway
tto02020
Two-component system
tto02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tto00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Thethe_01393
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Thethe_01393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tto03021
]
Thethe_01393
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tto02035
]
Thethe_01393
Transcription machinery [BR:
tto03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Thethe_01393
Bacterial motility proteins [BR:
tto02035
]
Flagellar system
Flagellar assembly proteins
Stator
Thethe_01393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
MOZ_SAS
HTH_10
HTH_28
DUF134
KORA
GyrB_insert
Toprim_Crpt
Ehrlichia_rpt
Motif
Other DBs
NCBI-ProteinID:
AGB19035
UniProt:
L0IHN4
LinkDB
All DBs
Position
complement(1370230..1370970)
Genome browser
AA seq
246 aa
AA seq
DB search
MSLLEQDLWDKYEKLKDGSSKEDIIIKYMPLVKHIVKRICLSEISKEDVDDLISQGMIGL
IDAVNKYDISKGVKFETYASIRIKGEIIDYLRKKDWIPRSLKKRYKSIEKTIERLEQEYK
REPTIEEIMDATKLSKNDVLKTLSYMNAGYISSLDEVIENNLKISSITESEITNPENEVL
MYDLKQNIAKAIDMLQEKERLIISLYYYEDLNYKEISKIMGLTESRISQIHSKAIKKLKE
KLNDLI
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcactactcgaacaagatttatgggataagtatgaaaaactaaaagatggtagttcg
aaagaagacataattataaaatatatgccacttgtaaagcacatagtaaaaagaatttgt
ttatcagaaataagcaaagaagatgtagatgaccttattagccaaggtatgattggctta
attgatgcagtcaataaatatgacatatcaaaaggagtaaaatttgaaacatatgcatca
ataagaataaaaggagaaataatagattatcttaggaaaaaagactggataccaagaagc
ctaaaaaagagatataaaagcattgaaaaaacaatagagcgattagaacaggaatacaaa
agagagccaacaatcgaagaaattatggatgcaacaaagttatcaaaaaatgatgtttta
aaaacgttaagctatatgaatgctggatatataagttctctggatgaagtaattgaaaac
aatctaaaaatttcttcaataacagagagtgagattacaaatccagaaaatgaggttttg
atgtacgatttaaaacaaaatattgcgaaagccatagatatgctacaagaaaaagaaaga
ttaataatttcattatactattatgaagatttaaactacaaggaaatcagtaaaataatg
ggcttgacagaatcacgaatatcacagattcattctaaggcaataaaaaaattaaaagaa
aagttaaatgatttgatataa
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