Thermoanaerobacterium thermosaccharolyticum M0795: Thethe_02540
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Entry
Thethe_02540 CDS
T02407
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tto
Thermoanaerobacterium thermosaccharolyticum M0795
Pathway
tto03420
Nucleotide excision repair
tto03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Thethe_02540
03430 Mismatch repair
Thethe_02540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tto03400
]
Thethe_02540
Enzymes [BR:
tto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Thethe_02540
DNA repair and recombination proteins [BR:
tto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Thethe_02540
MMR (mismatch excision repair)
Other MMR factors
Thethe_02540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
Viral_helicase1
AAA_30
SLFN-g3_helicase
DEAD
nSTAND3
NACHT
AAA_16
DUF6678
ResIII
FNIP_C
HSBP1
ATG16
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AGB20105
UniProt:
L0IKP5
LinkDB
All DBs
Position
complement(2510486..2512723)
Genome browser
AA seq
745 aa
AA seq
DB search
MKASEHPSYNEEKLKLNETIEWIEGEIAKSEEEGKILEKKISETRREVKSALDERIVLQK
QLKMSNERKLRRYKESKSKPYFGRVDFKEDGDNKIKKLYIGKYGLSDEKHDEPVVIDWRS
PIADIYYSGEAGAVSYKSPSGEISGEIKLKRRYEIEEGELLNIFDEKLKEMILDDEFLTS
SLEKSADNRLKDIVATIQKEQNDIIRAPLDRALIIQGVAGSGKTTIALHRMAYLIYQNQR
NKGREDYYMVIAPNKLFLNYISDILPDLGADDVLQTTFEDYALKITGIKEKLKVANDKIS
YLLGDAPINEKRKTIMVSRFKGSLLFKAIIDNYFKQFLYKYIPDCDINIDGNIIFTSIEL
KKLFIENFVYLPLQKRKEQFISYLKNRLKKNKDLIADGIEKEYSEKIRFVKDNINDNEVR
QSKVIELYDLRDKEIGDIPVKIDKAICDYSEKWTQLDTVKIYRDIMDFETIKKLSHGKIE
DEKISYICDYTKAMLDKDEIENEDLAPILYIHKYLFGLDDAGKFTHIVVDEAQDFSEFKL
YLLKEIVKGDSITIVGDVAQGIYSYRGIKSWDDLNNHVLNGKATYKMLKKSYRTTVEIME
YANSVIDKSKNKSIVKAEPIMRHGDVPEIVRIRDYDELIHDILNNLQDDELTTAIICKTD
EMTKKIYESLKKDIDDITLISDKTELYKGRKIVIPSYLSKGLEFDRVIIPDADSYNDTEL
ELKLFYVAITRPLHKLKLYYTNLYN
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcatcagagcatccatcgtacaacgaagaaaaactgaagcttaatgaaacaata
gaatggatcgaaggtgagatagcaaaaagtgaagaggaaggcaagatattagagaaaaag
atatctgaaactcgaagggaagtgaagtcagcacttgacgaaaggatagttttacagaag
cagcttaagatgagcaatgaaagaaaacttagaaggtataaagaatcgaaaagcaaaccg
tactttgggcgtgtcgactttaaggaagacggtgataataagataaaaaaactctatatt
ggcaaatacggtttaagcgacgaaaagcacgatgaacctgtcgtcatcgattggcgatct
cctattgcagatatttactacagcggtgaggccggtgcggtatcttacaaatcaccaagt
ggcgaaatatctggtgaaataaagttaaagaggaggtacgaaatagaagaaggtgaactt
ctcaatatttttgatgagaaattaaaagagatgatcttggatgacgaatttttaacgtcg
tctcttgagaagagtgctgataatagacttaaagacatagttgcgacgatacaaaaagag
caaaatgatattataagggcaccattagatagggccttgattatacaaggtgttgcagga
agtgggaagacaacaattgcacttcaccggatggcatatcttatttatcaaaatcagaga
aataaaggaagagaagattattacatggtaatagctccaaacaaactttttcttaattac
atatctgatattttgccggatcttggtgctgacgatgtcctgcagacgacatttgaagat
tatgcattaaaaattacggggataaaagaaaagctaaaagtggcaaatgataagatatca
tatcttttaggagatgcgcccatcaacgaaaagcgaaagactattatggtgtcaagattc
aagggaagcttgttatttaaagcaattatcgataattattttaaacagtttttatataag
tacattcctgactgtgatataaatattgatggaaacattatctttacatcaatagagctt
aaaaagttatttattgaaaattttgtctacctgccattgcagaaaagaaaagagcaattt
atttcgtatttgaagaacagactaaagaaaaataaagatttaattgcagatggtattgaa
aaggagtatagcgaaaaaatcagatttgtcaaggataatattaatgacaatgaggtaagg
cagtctaaggtaattgaactgtatgatcttagagataaagaaataggagatataccagtt
aaaatcgacaaagcaatttgtgattattctgaaaaatggacccaattagatacagttaaa
atttacagagatataatggattttgagaccattaagaaactttcgcatggtaaaatcgaa
gacgaaaaaatctcgtatatatgtgattatacaaaagcgatgcttgacaaagacgaaata
gaaaacgaggatttagcgcccattttgtacatacataagtatttgtttggtttagatgat
gcaggcaaatttactcatatagtcgttgacgaagcacaggattttagtgaatttaaactt
tatttgttaaaggaaatagtaaaaggtgattctataacgatagttggcgatgtagcacaa
ggcatatactcgtatagaggaataaaatcttgggatgacttaaataatcatgtgttaaat
ggcaaggcgacatataagatgcttaagaaaagctatagaacgactgttgaaataatggaa
tacgccaacagcgtaattgacaaaagcaagaataaaagcatagtaaaagcagagcctatt
atgaggcacggtgatgtaccagagattgttagaataagagactatgatgaactgattcat
gatattttaaataatttgcaggatgatgagcttacgacagcgataatttgtaagacagat
gaaatgacgaaaaagatatatgaaagtttaaaaaaggatatagatgacattacattgatt
agcgataaaacggaattatataaaggtaggaaaatcgtgataccatcgtatttgtctaaa
ggattggaattcgatagagtgattatacctgatgcagattcatacaatgatacagaacta
gagcttaaattgttttacgttgcaataacgagaccacttcacaaacttaaattatactac
acgaacctttataattaa
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