Thermochromatium tepidum: E6P07_01890
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Entry
E6P07_01890 CDS
T06573
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
ttp
Thermochromatium tepidum
Pathway
ttp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E6P07_01890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttp03019
]
E6P07_01890
Messenger RNA biogenesis [BR:
ttp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
E6P07_01890
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
QGU31840
UniProt:
A0A6I6ECF4
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All DBs
Position
394761..395309
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AA seq
182 aa
AA seq
DB search
MIDHDGFRPNVGIILSNQDRRLFWGRRVGQNAWQFPQGGINPDETPEQAMFRELEEEVGL
CAQQVTILGCTRGWLRYHLPKRYIRRHCRGAGPICIGQKQIWFMLRVDCGEDAFCLDRTD
KPEFDAWRWVRYWQPLYEVVYFKRRVYQQALEELAPILYPEGVPDRRHVYVGPSRLLRQG
YP
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgaccacgacggcttcagacccaatgtcggtatcatcctgagcaatcaggatcgt
cgtctattttgggggcgccgcgtcggtcagaatgcctggcaatttccacagggtggcatc
aaccccgacgagacccccgagcaggccatgttccgcgaactagaagaggaggtcgggctc
tgcgcacagcaggtcaccatcctgggatgcacgcgcggctggctgcgttatcacctgcca
aagcgctatatccggcgccattgccgcggagcgggtccgatctgcatcggccaaaaacag
atctggttcatgctgcgggtcgattgcggtgaggacgccttctgtctcgatcgcaccgac
aagcccgaattcgatgcctggcgctgggtccgatattggcagccgctctacgaggtcgtg
tattttaagcgtcgtgtttatcagcaggcactcgaagaactggcgccgatcctttatccg
gaaggggtcccggatcgccgtcatgtctatgttggcccctccagactgctgcgccaggga
tatccctga
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