Thermochromatium tepidum: E6P07_02445
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Entry
E6P07_02445 CDS
T06573
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ttp
Thermochromatium tepidum
Pathway
ttp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E6P07_02445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttp03019
]
E6P07_02445
03009 Ribosome biogenesis [BR:
ttp03009
]
E6P07_02445
Enzymes [BR:
ttp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E6P07_02445
Messenger RNA biogenesis [BR:
ttp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E6P07_02445
Ribosome biogenesis [BR:
ttp03009
]
Prokaryotic type
rRNA helicases
E6P07_02445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
QGU31943
UniProt:
A0A6I6E5J1
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All DBs
Position
522704..524650
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AA seq
648 aa
AA seq
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MDTPDETSVGFDALGLSPVIAQAVKNLGYESPTAIQSQCIPHLLAGRDLLGQAQTGTGKT
AAFALPLLSRLDPDLRKPQVLVLTPTRELALQVAEAFQRYAAGLKGFNVLPIYGGQGYGL
QLAQLKRNPQVIVGTPGRVMDHIRRGTLVLDAIRALVLDEADEMLNMGFAEDIDWIFDQA
PVERQVALFSATMPPAIRRVAQARLVDPIEVRIAADSETVDTIDQHHCIVTRFHKLDALT
RIMELEAFDGLLIFVRTKNATTELADKLKAHGFAAEPLNGDMNQEMRERTIERLKQGQLD
VLVATDVAARGLDVERISHVINYDIPTDPAAYVHRIGRTGRAGRTGRAILLVEPRERGLL
KSIERVIRRRIPAMEPPSAAALSESRIDRFIGEIRKTLSEQDLDFFYRLLARLSQEQEIE
MMDIAAALAYLNQRERPLNIKEDPLRPPKRFDGRGESGWDRDAGRRQGGWEDRPPPRERF
DDNAGHRDERRLRPERPQPRRDDADLTSYRIEVGHRHGVTPREIVGAIANESGLEGRYIG
RIDIRDDHSVVDLPKGMPNEIFQHLKRVYVRGQALRIAPADEGRATRKGNAWEGHHEGAR
DREARPPRAGADFPHRDRNGDLRPRPSPGKRSDGVARRGPGAGRKFRD
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggataccccagacgaaacgagcgtcggcttcgacgcgctcggtctttcgcccgtgatc
gcgcaagcggtcaagaacctcggctacgaatccccgacggcgatccagagtcagtgcatc
cctcatctgctcgccgggcgtgacctgcttggccaggcccagaccggtaccggaaagacc
gccgcctttgccttgccgctgctcagtcgtctcgatccggatctgcgcaagccgcaggtg
ctggtgctcacgcccacacgcgaactcgcgctccaggtggccgaggccttccagcgctat
gccgctggactcaagggcttcaatgtgctccccatctacggtggtcagggctatgggctg
caacttgctcagctcaagcgcaatccgcaggtgatcgtcgggactccaggacgggtcatg
gatcacatccggcgcggcaccctggtgctggacgcgatccgcgccctggtgctggatgag
gccgacgagatgctcaacatgggttttgccgaagacatcgactggatcttcgatcaggcc
ccggtcgagcgtcaggtcgcgctgttttcggccactatgccgccggcgatccggcgcgtg
gctcaggcgcggctggtcgacccgatcgaggtcaggatcgctgccgactccgagacggtc
gataccatcgatcagcatcactgtatcgtcacccgcttccataagctcgacgcgctcacc
cggatcatggagctggaggcgttcgacgggctcttgatcttcgtgcgcaccaagaacgcc
accaccgaactggccgacaagctcaaggcgcatggtttcgccgccgaaccgctcaatggc
gatatgaaccaggagatgcgcgaacgcaccatcgaacggctcaagcagggtcagctcgat
gtgctggtcgccacagatgtggccgcgcgcggtctggatgtcgagcgcatcagtcatgtg
atcaactacgatatcccgaccgatcccgcggcctatgtgcaccgcatcggacgcaccggg
cgtgccgggcgtaccgggcgcgcgatcttgctggtcgagccgcgcgagcgcggactgctc
aagtcgatcgagcgcgtcatccggcggcgcattccggcgatggagccgccctcggcggcg
gcgctgagcgagtcgcggatcgaccgcttcatcggcgagatccgcaagaccctctcggaa
caggacctcgactttttctatcgtctgctcgcgcgcctcagtcaggagcaggagatcgag
atgatggatatcgccgccgcgctggcctacctcaatcagcgcgaacgtccgttgaacatc
aaagaggatccgctgcgtccacccaagcgtttcgatgggcgcggcgaatctggatgggat
cgcgacgccggccggcgtcagggcggttgggaggatcgtccgccacctcgtgagcgcttt
gacgacaacgctggacatcgcgatgagcgccgtctgcgcccggaacgccctcaaccgcgc
cgcgacgacgccgatctgaccagctatcgcatcgaggtcggccatcggcacggtgtgacc
ccgcgcgagatcgtcggcgccattgccaacgaatccggtctggagggacgctatatcgga
cgcatcgacatccgtgacgatcactcggtcgtcgacctgcccaagggcatgccgaacgag
atcttccaacacctcaagcgtgtctatgtgcgcggtcaggcgcttcggatcgcgccggcc
gacgagggccgggcgacaaggaagggcaacgcttgggaaggtcaccatgagggggcgcgc
gatcgcgaagcgagaccgccgcgcgctggagctgattttccccatcgcgatcgcaacggc
gacttaaggccccggccaagcccaggcaagcgcagcgatggtgttgccaggcgtggacct
ggggccgggcgcaaattccgcgattga
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