Thermochromatium tepidum: E6P07_02650
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Entry
E6P07_02650 CDS
T06573
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ttp
Thermochromatium tepidum
Pathway
ttp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ttp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
E6P07_02650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttp03019
]
E6P07_02650
03009 Ribosome biogenesis [BR:
ttp03009
]
E6P07_02650
Messenger RNA biogenesis [BR:
ttp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E6P07_02650
Ribosome biogenesis [BR:
ttp03009
]
Eukaryotic type
Pre-60S particles
RNases
E6P07_02650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QGU31979
UniProt:
A0A6I6EAM7
LinkDB
All DBs
Position
566649..567197
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AA seq
182 aa
AA seq
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MGKSEHNLIWIDLEMTGLDPECDRILEIATLITDSQLEVVAEGPVIAIHQDESILAGLDD
WNREHHGASGLLERVHLSHYSVGDAETATLDFVARYVPAGVSPLCGNSICQDRRFLARWM
PRLEAYCHYRNLDVSTLKILAQRWAPRVLDGFKKKSRHLALEDIRESIGELRHYRAHFLR
LD
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagagcgagcacaacctgatctggatcgatttggagatgaccgggctggatccc
gagtgcgaccggatcctggagatcgcgaccctgatcaccgacagccagctcgaggtagtg
gccgagggaccagtgatcgcgatccatcaagacgaatcgatcctggccgggctggacgac
tggaatcgcgagcatcacggtgcctccggtctgttggagcgcgttcacctcagccactac
agtgtcggcgacgccgagaccgcgaccctcgacttcgtcgcccgctacgtcccggctggg
gtctcgccgctgtgcggcaacagcatctgtcaggatcgccgcttcctggcgcgctggatg
ccgcgtctggaggcctattgtcattatcgcaacctagacgtgagcacgctcaagatcctg
gcccagcgctgggcgccccgggtgttagatggcttcaagaagaaatcgcgccatctggcg
ctcgaggacatccgtgagtcaatcggtgaactgcgtcactatcgtgcccactttctcagg
ctcgactga
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