Thermochromatium tepidum: E6P07_04550
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Entry
E6P07_04550 CDS
T06573
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ttp
Thermochromatium tepidum
Brite
KEGG Orthology (KO) [BR:
ttp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ttp03009
]
E6P07_04550 (rimO)
Enzymes [BR:
ttp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
E6P07_04550 (rimO)
Ribosome biogenesis [BR:
ttp03009
]
Prokaryotic type
ribosomal protein modification factors
E6P07_04550 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Phosphatase
CLP1_P
PIN_9
Motif
Other DBs
NCBI-ProteinID:
QGU32325
UniProt:
A0A6I6E064
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All DBs
Position
972307..973647
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AA seq
446 aa
AA seq
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MPAHRHGTLPRIGFVSLGCPKATVDSERILTRLRAEGYLLQPTHAEADLVIVNTCGFIDA
AIDESLEAIAEALDENGRVIVTGCLGARAELVRARHPEVLAITGPQALEEVMAAVHAHLP
APHAPFTSLIPPPGVRLTPRHYAYLKISEGCNHGCRFCIIPSLRGPLVSRPIGEVLEEAG
RLVESGVRELLVVAQDTGAYGLDLGHRPGFWGGRPLRTHITDLARALGELPAWIRLHYVY
PYPHVDTLIPLMAEGVILPYLDLPLQHGSESVLRAMRRPAATEKMLDRLARWRAECPELV
LRSTFIVGFPGETQDDFEQLLDFLRAARLDRVGCFPYSPVAGAAANELPNPVPEAVKQER
LERLMAVQAEISREKLAARIGQRLTVLVDTVEEDALIARSYGDAPEIDGEVIIEGAWEID
PGDFIEVVVTEASEHDLWAQPVDPDD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctcatcgccacggaacgctcccgcgtattggtttcgtcagtctcggctgcccc
aaggccacggtcgactccgagcgcatcctcacccggctgcgcgccgagggttatctcctt
cagccgacccatgccgaggccgatctggtcatcgtcaacacctgtggcttcatcgacgcg
gcgatcgatgagtcactggaggccatcgccgaggcgctcgatgagaacgggcgggtgatc
gtcaccggctgtctcggggcacgtgcggagctggtgcgcgcgcgtcatcccgaggtgctc
gccatcaccggcccccaggcgttggaagaggtgatggccgctgtgcacgcacatctgccc
gccccacacgcccccttcaccagtctcatcccgcccccgggcgtgcgtctgacgccgaga
cactatgcctatctgaagatctcagagggctgcaaccatggctgtcgcttttgcatcatc
cccagtctgcgcggacccttggtcagccgcccgatcggtgaggtcctggaggaggccggg
cgtctggtcgaatccggggtccgcgaactactcgtggtcgcgcaggacaccggcgcctac
gggctggacctgggccatcggcccgggttctggggcgggcgtccactgcgcacccatatc
accgatctggcgcgggccctgggcgagctgccggcctggatccggttgcactatgtctat
ccctatccgcacgtcgatacgctcatcccgctgatggccgagggggtgatcctgccctat
ctggacctgccgctccagcatggcagtgagtcggtattgcgtgcgatgcgccgtccggcg
gccaccgagaagatgctggaccgtctggcgcgctggcgtgccgaatgtcccgagctggtg
ctgcgcagcaccttcatcgtcggctttccgggcgagacccaggacgacttcgagcagttg
ttggacttcctgcgcgcggcgcggctcgaccgggtcggttgttttccctattcacccgtc
gcgggcgcagcggccaacgagctgccgaatccggtgcccgaggccgtcaagcaggaacgg
ctggagcgcctcatggcggtccaggccgagatcagccgcgagaaactggctgcgcgcatc
ggtcagcggctcactgtgctggtcgacacggtggaagaggacgcactcattgcccgcagt
tatggcgacgcccccgagatcgacggcgaggtcatcatcgagggcgcctgggagatcgat
ccgggcgacttcatcgaggtcgtggtcaccgaagccagcgaacacgacctctgggcccag
ccggtcgatccggatgactga
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