Thermochromatium tepidum: E6P07_04660
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Entry
E6P07_04660 CDS
T06573
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ttp
Thermochromatium tepidum
Brite
KEGG Orthology (KO) [BR:
ttp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttp03032
]
E6P07_04660 (topA)
03400 DNA repair and recombination proteins [BR:
ttp03400
]
E6P07_04660 (topA)
Enzymes [BR:
ttp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
E6P07_04660 (topA)
DNA replication proteins [BR:
ttp03032
]
Prokaryotic type
DNA Topoisomerases
E6P07_04660 (topA)
DNA repair and recombination proteins [BR:
ttp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E6P07_04660 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
DUF1272
CoiA_N
Motif
Other DBs
NCBI-ProteinID:
QGU32346
UniProt:
A0A6I6EAM9
LinkDB
All DBs
Position
999461..1001776
Genome browser
AA seq
771 aa
AA seq
DB search
MNLVIVESPAKAKTIKKYLGPSFDVLASYGHVRDLVPKEGAVDPDHGFAMKYQVIERNEK
HVQAIAKKLKDCEALYLATDPDREGEAISWHIHELLKSRRQLGDKPVHRVVFNEITQRAV
QEAIAHPRQISYDLVNAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLICER
EAEIESFVKREYWTIEADAAKDQRPFVARLIRFGGEKVEQFSITDQARATEVKSALERAA
TGRLRVEQVERKQRRRQPAPPFITSTLQQEAARKLGFSAQNTMRVAQQLYEGVDVGSGAV
GLITYMRTDSVNLAQEAIAEIRAYVAERYGAAGLPDSPRLFKTKSKNAQEAHEAIRPTSI
RREPSAVKPYLTVEQFKLYELIWRRTLACQMAQALIDQVAVDLSAGTDTGHLLRATGSTV
VDPGFMRVYLEGRDDAKGADDDEERMLPEMQVGDWVELIAIRPEQHFTEPPPRYSEATLV
KALEEFGIGRPSTYASIISTLQEREYVILDKKRFVPTDIGRVVNRFLTDYFTSYVDYDFT
ARLEDELDAVSRGEEEWVPVLERFWRPFKALVDHTQEHVKRSDVTQERIKETCPKCGGQL
AIRLGRNGRFIGCTHYPECDYTRDLNPDRTEREAAPEVIEGRLCPLCGSTLEIKRGRYGK
FIGCSAYPTCKYIEPLDKPEDTGISCPQCGQGRLQKKKSRRGKLFYSCSTYPKCDYAVWD
EPLAEPCPSCGWPILTLKATKTQGVFKVCPRKECGYRAPVAEVEATSGALD
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcgtcatcgtcgaatccccagccaaggccaagaccatcaagaaatatctcgga
cccagcttcgatgtcttggcctcctacggccatgtgcgtgatctggtccccaaggaggga
gcggtcgatccggaccatggtttcgcgatgaagtaccaggtcatcgagcgcaacgagaag
cacgtccaggccatcgccaaaaaactcaaggactgtgaggcgctctatttggccaccgac
cccgaccgcgagggcgaggccatctcctggcacatccacgagctgctcaagagtcggcgt
caactcggcgacaagccggtacatcgcgtggtcttcaacgagatcacccagcgtgcggtc
caggaggccatcgcgcatccgcgccagatctcatacgacctggtcaatgcccagcaggcg
cgccgggcgctcgactatctggtcggcttcaatctctcgcccctgctgtggaagaagatc
cggcgtggactctcggccgggcgggtgcagagtccggcgctgcgcctgatctgcgagcgc
gaggccgagatcgagtccttcgtcaagcgcgagtactggaccatcgaggccgatgcagcc
aaggaccaacgtcccttcgtcgcccggctcattcgcttcggcggcgagaaggtcgagcag
ttcagcatcaccgaccaggcgcgcgccactgaggtcaagtccgcgctggaaagggccgcc
actggccggctcagggtcgagcaggtcgagcgcaagcagcgccggcgccagcccgccccg
cccttcatcacctccacccttcagcaggaggccgcgcgcaagcttggttttagcgcccag
aacaccatgcgtgtggctcagcagctctacgagggcgtggatgtcggctcgggtgcggtc
ggactcatcacctatatgcgcaccgactcggtgaatctggcccaggaggccatcgccgag
atccgtgcctatgtcgccgaacgctatggcgcggcggggcttccggacagcccgcgcctg
ttcaagaccaagtccaagaatgcccaggaggcccacgaggccatccgtccgacctcgatc
cggcgcgaaccgtccgccgtcaagccttatctcacggtcgagcagttcaagctctacgag
ctgatctggaggcgcacgctcgcctgtcagatggcccaggcgctcatcgatcaggtcgca
gtcgacctgagtgccggcacggatactggccatctgttgcgcgccaccggctcgacggtg
gtcgatcctggcttcatgcgcgtctatctggaaggacgcgacgatgccaagggggccgac
gacgatgaggagcggatgctccccgagatgcaggtcggcgactgggtcgagctgatcgcg
atccgtcccgagcaacacttcaccgagccgccgccgcgctatagcgaagcgaccttggtc
aaggcactcgaagagttcggtatcggacgcccctcgacctatgcctcgatcatctcgacc
ctccaggagcgtgaatacgtgatcctggacaagaaacgctttgtaccgaccgatatcggg
cgcgtggtcaatcgcttcctgaccgactatttcacctcttacgtcgactacgacttcacc
gcccgtctggaggacgagttggatgccgtctcgcgcggggaggaggaatgggtacccgtg
ctggagcgtttctggcgtccgttcaaagcgctggtcgaccacacgcaagagcacgtcaag
cgcagcgatgtgacccaggaacgtatcaaggagacctgccccaagtgcggcggtcagctc
gcgatccggctcgggcgcaatgggcgcttcatcggctgcacccactatcctgagtgcgac
tacacccgcgacctcaatccggacaggaccgagcgcgaggcagcgcccgaggtcatcgag
ggccgtttgtgtccattgtgcggatcgacgctcgagatcaagcgcggacgctatggtaag
ttcatcggatgcagcgcctatccgacctgcaagtacatcgagccgctcgacaagcccgag
gacacgggcatcagctgcccgcagtgcggtcagggcaggctacaaaagaagaaatcccgg
cgcggtaagctgttctattcctgctcgacctatcccaagtgcgactatgcggtctgggac
gagccgctcgccgaaccctgtccgagctgcggctggccgatcctgacgctcaaggccacc
aagacccagggcgtgttcaaggtctgtccgcgcaaggagtgtggttaccgcgccccggtc
gcggaagtggaggccacgtccggcgcgctggactga
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