Thermochromatium tepidum: E6P07_04815
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Entry
E6P07_04815 CDS
T06573
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ttp
Thermochromatium tepidum
Pathway
ttp03030
DNA replication
ttp03430
Mismatch repair
ttp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ttp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E6P07_04815 (dnaE)
03430 Mismatch repair
E6P07_04815 (dnaE)
03440 Homologous recombination
E6P07_04815 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttp03032
]
E6P07_04815 (dnaE)
03400 DNA repair and recombination proteins [BR:
ttp03400
]
E6P07_04815 (dnaE)
Enzymes [BR:
ttp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E6P07_04815 (dnaE)
DNA replication proteins [BR:
ttp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E6P07_04815 (dnaE)
DNA repair and recombination proteins [BR:
ttp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E6P07_04815 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HROB
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
QGU32371
UniProt:
A0A6I6DXR1
LinkDB
All DBs
Position
1030969..1034586
Genome browser
AA seq
1205 aa
AA seq
DB search
MDPTFVHLHLHSEYSLVDGLVRLKPLVKAVAAAGMPAVAVTDQCNLFGLVRFYKAAIASG
VKPIAGADLWVRNPEDANRPYRLVLLVQDETGYHNLMQLVSRSFIEGQHQGLAQVERDWI
LEAHQGLIALSGGTRGDVAEALLRGRDELAEQRLDAWLSVFEDRYYLELIRTGRPQEGEL
IEASVDLALRRGVPVVATNDVRFLLAEDFEAHEARVCIHQGRTLDDPRRPRDYSEEQYLR
TPDEMAELFADLPEALENTVEIAKRCNLELKLGKTFLPVFPVPEGMTTESFFIEQSRLGL
ERRLERILDRNAPEYAARRRIYEERLETELAVIIQMGFPGYFLIVADFIQWAKDNGIPVG
PGRGSGAGSLVAYALKITDLDPIAHDLLFERFLNPERVSMPDFDIDFCMEGRDRVIDYVT
RKYGREAVSQIITFGTLAAKAVVRDVGRVLGYPYGFVDKIAKMVPFELGMTLEKALKESE
DLRRAYEEDEEVRTILDLARKLEGLTRNAGKHAGGVVIAPTKLTDFVPLYCEPGGSNLVT
QFDKDDVEQVGLVKFDFLGLRTLTIIDWALKTINAGRAARGEPPLDLGCIDPCDPKAFDL
LRRCETTAVFQLESRGMKELIKKLRPDCFDDITALVALFRPGPLQSGMVDDFIERKHGRA
PVAYPHPDLEPILKPTYGIILYQEQVMQIAQVLGGYTLGGADLLRRAMGKKKPEEMAKQR
ATFEQGARARGIDGQLASHIFDLMEYFSGYGFNRSHSAAYALVSYQTLWLKAHYPAAFMA
AVLSADMDNTDKVVTLIDECRMMKLRVEPPAINRSDECFSVADDRTIVYGLGAVKGVGES
AIAAILEARRAGGPFRDLWDFCGRIDLQRVNRRVLESLIRAGALDELGPNRATLMDHLPP
ALKAAEQSRNTRATGQVDLFGLLEPSGQPAPDPQLASEILADWEDEQRLQGEKETLGLYL
TGHPIDRYEDELKAMGAVRIARLLETDRELGRRDLPVRSAQSGREKYTVVGLVVGVRHGK
TQRGRMGSVLLDDRTGRIEATVFSELYEQVRQLLVADRILSLTGTLNFDEFRDTWSLRAD
SVRPLEEARATAADHLLLTLDLSDSSAHAHGLERVEELRTTLLAHRDLARETSLPIRLIY
RRPGAVGELKLGSAWRVRPTDALLKQLRGLLGAGNVRVSYERPEQPVQPVPMPELQPAPR
LRAVS
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
gtggacccaacctttgttcatctgcatctgcattccgagtattcgctggtcgatggcctg
gtgcgtctcaagcccctggtcaaggcggtcgcagcggccgggatgccggcggtcgccgtc
accgaccagtgcaatctgttcgggctggtgcgcttctacaaggcggccatagcgtccggg
gtcaagccgatcgccggcgccgatctctgggtgcgcaaccccgaggacgccaaccgcccg
taccgactggtcctgctggtccaggacgagacgggctatcacaacctgatgcagctcgtc
tcgcgcagcttcatcgagggtcaacatcaggggttggcccaggtcgaacgcgactggatc
ctggaggcgcatcagggcctgatcgcgctctcgggggggacgcgcggcgacgtggccgag
gccttgctcaggggtcgggacgagctggccgagcagcgcctcgatgcctggctgtcggtg
ttcgaggaccgctattacctggagctgatccgcaccggtcgcccccaggaaggtgagctg
atcgaggccagtgtggacctggcgctgcggcgcggtgtgcccgtggtggcgaccaatgac
gtgcgtttcctcctcgccgaagacttcgaggcccatgaggcgcgcgtctgcatccatcag
ggccgcacccttgacgacccgcgccgcccacgcgactacagcgaagagcagtatctgcgg
accccggacgagatggccgagctgttcgccgatctgcccgaggccctggagaacacggtc
gagatcgccaagcgctgcaacctggaactgaagctcggcaagacctttctcccggtgttc
ccggtccccgagggcatgactacggagagcttcttcatcgagcagtcgcgtctggggttg
gaacggcgtctggagcggatcctcgatcgcaacgcacccgagtatgccgcgcggcgtcgg
atctatgaggaacggctcgagaccgagctcgccgtcatcatccagatgggcttccccggc
tacttcttgatcgtggccgacttcatccaatgggccaaggacaacggcatcccggtcggg
cccgggcgtggctctggggccggttccctggtcgcctatgcgctcaagatcacggatctc
gacccgatcgcccatgacctgctgtttgagcgcttcctgaacccagagcgcgtgtccatg
cccgacttcgatatcgacttctgcatggaagggcgcgatcgggtcatcgactatgtgacg
cgcaaatacgggcgcgaggcggtgtcgcagatcatcaccttcggcaccctggcggccaag
gcggtggtgcgcgatgtcgggcgcgtcctgggttatccctatggtttcgtcgacaagatc
gccaagatggtgcccttcgagctggggatgaccctcgaaaaggcactcaaggagagcgag
gatctccggcgcgcctatgaggaggacgaagaggtgcgcaccatcctcgacctggcgcgc
aagctggagggcctgacccgcaacgccggcaagcacgccggcggcgtggtgatcgccccg
accaagctgaccgatttcgtaccgctctattgcgaaccgggtgggtcgaatctggtcacc
cagttcgacaaggacgacgtcgagcaggtcgggctggtcaagttcgactttttggggctg
cgcaccctcaccatcatcgactgggcgctcaagaccatcaatgccgggcgcgccgcccgg
ggcgagccaccgctcgacctcgggtgtatcgacccgtgcgatcccaaggcctttgatctg
ctcagacgctgcgagacgacggcggtgtttcagctcgaatcgcgcgggatgaaggagctg
atcaagaagctcaggcccgactgcttcgacgacatcacggcgctggtggcgctgttccgg
cctggtccgctgcaatcgggcatggtcgatgacttcatcgaacgcaagcatgggcgcgcc
ccggttgcctatccgcacccggacctggagccgatcctcaagcccacctatggcatcatc
ctctatcaggagcaggtgatgcagatcgctcaggtgttgggcggctataccctgggtggt
gccgacttattgcgaagggccatgggcaagaagaagcccgaggagatggccaagcagcgc
gcgaccttcgagcagggggcgcgggcacgcgggatcgacggccagcttgcgtcgcatata
tttgatttgatggagtatttttctggttacggcttcaaccgcagccatagtgccgcctat
gccctggtcagctaccagaccctctggctcaaggcgcactacccggctgccttcatggcg
gccgtgctctcggcggacatggacaacaccgacaaggtcgtcaccctgatcgacgaatgc
cggatgatgaagcttcgggtcgagccaccggccatcaatcgttccgacgagtgcttcagc
gtcgccgatgacaggaccatcgtctatggtctgggcgcggtcaagggcgtgggcgagtcg
gcgatcgcggccatcctagaggcgcgtcgagccggcggacccttccgcgacctctgggac
ttctgcggtcgtatcgatctgcaacgggtcaaccgccgcgtactggagtcgctgatccgc
gccggcgcgctcgatgaactcggacccaaccgcgccacactcatggaccatctgccgccg
gcgctcaaggccgccgagcagtcgcgcaacacccgcgccaccggtcaggtcgatctattc
ggcctgctcgaacccagtggacagcctgcgccggatccgcagctcgcctctgagatcctc
gccgactgggaggatgagcagcgtctccagggcgagaaggagacgcttggactctatctg
accgggcatccgatcgaccgctacgaagacgagctcaaggccatgggcgcggtgcgcatc
gcccgtttgctcgagaccgatcgcgaactcggacgccgcgacctgcctgtgcgcagcgcc
cagtcaggtcgcgaaaaatacaccgtcgtcggactggtggtcggtgtgcgccacggcaag
acccagcgcggacgtatgggctcggtgctcctcgacgatcgcaccggacgcatcgaggcc
acggtcttctctgagctctatgagcaggtgcgtcagctgctggtcgccgaccggatcctg
agccttacgggcacgctcaacttcgacgagttccgcgatacctggtcgctgcgcgccgac
agcgtgcgccccctcgaagaggcgcgcgcgaccgccgccgaccacctgctcctgacactg
gatctgtccgattcgtctgcccatgcgcacggactggagcgggtcgaggaactgcgcacg
accctgcttgcccatcgcgacctggcgcgcgagacaagcctgccgatccgcttgatctac
cgtcgccccggtgcggtcggcgagcttaagctggggagcgcctggcgcgtccgtccgacc
gatgccttgctcaagcagttgcgtgggctgttgggagccggcaatgtccgtgtctcttat
gagcgaccagagcaacccgtccagccagtgcccatgcccgagttgcagccggcaccgcga
ttgcgggcggtgtcctga
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integrated database retrieval system
