Thermochromatium tepidum: E6P07_04825
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Entry
E6P07_04825 CDS
T06573
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ttp
Thermochromatium tepidum
Pathway
ttp03030
DNA replication
ttp03410
Base excision repair
ttp03420
Nucleotide excision repair
ttp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ttp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E6P07_04825 (polA)
03410 Base excision repair
E6P07_04825 (polA)
03420 Nucleotide excision repair
E6P07_04825 (polA)
03440 Homologous recombination
E6P07_04825 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttp03032
]
E6P07_04825 (polA)
03400 DNA repair and recombination proteins [BR:
ttp03400
]
E6P07_04825 (polA)
Enzymes [BR:
ttp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E6P07_04825 (polA)
DNA replication proteins [BR:
ttp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E6P07_04825 (polA)
DNA repair and recombination proteins [BR:
ttp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
E6P07_04825 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E6P07_04825 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QGU33957
UniProt:
A0A6I6ELT8
LinkDB
All DBs
Position
complement(1035398..1038103)
Genome browser
AA seq
901 aa
AA seq
DB search
MSQEYPLLLVDASGYLFRAYHALPKLTNSRGEPTGALVGVLNMLRKLIEDQRPDYIGVVF
DAGGRGFRHERYPDYKANRPAPPEDLRAQIEPLQTIIRALGLPLLVVPGVEADDVIGTLS
TQAAALGLPTLISTGDKDLAQLVDEHVTLVNTMTGTWLDPAGVREKFGVPPERIVDYLAL
MGDSVDNIPGVPGCGPKTAAKWLTDYGDLDGVIAQAASIKGKIGESLRTALDQLPLAREL
LTIKRDVALDFGPTDLRPTPPDIATLRAWYERLELRRLLATLDGMGVAGAPPTQRHQTGH
EPQYELVLTESALEAWLARLRTAELIALDTETTALDARRAELVGISFAVAPGQAAYVPLA
HTYPGAPQQLDRDLVLARLKPVLEDPDRPKVGQNLKYDLTVLARYGIELHGIAHDTLIAS
YVLDSTARHDLDSLAKRFLGHDTIRFKDVAGTGSKQIRFDQVPLEQAGPYAAEDAEVTLR
LHQVLQPRLTAVPKLERLYREIEMPLVPVLARLERAGVLIDAEQLESQSAELARRILELE
ETAQRVAGRRFNLGSPKQIAALLFEELGLPVVAKTPKGAPSTSEEVLEQLAQVHELPRII
LEHRLLSKLKSTYTDKLPRLIDPATGRIHTSYHQTVTATGRLSSSDPNLQNIPIRTEEGR
RIRRAFIAAPGHRLLAADYSQIELRIMAHLSGDARLLAAFAAGLDIHRATAAEILGLAPE
AVTSEQRRSAKAINFGLIYGMSAFGLAHQLGIERAAAQAYVERYFERYPGVREFMERIRH
QARECGYVETLFGRRLHLPEIGHSNQTRRAAAERTAINAPMQGTAADIIKRAMIAVDVWI
ETTGAPARLILQVHDELVLEVAETALEETREAVRAAMEGAAELAVPLVVEIGSGANWDDA
H
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagagtatccactgctcctcgtcgatgcctctggctatctgttccgggcctat
cacgcactgcccaagctgaccaattcgcgcggcgagccgaccggggccctggtcggcgtg
ctcaatatgctgcgcaagctgatcgaggatcagcggcccgactacatcggtgtggtcttc
gatgccggcggtcgggggtttcggcatgaacgctatccagactataaggccaatcgcccg
gcgccgccggaggatctgcgcgcccagatcgagccgctccagacgatcatccgtgccctg
gggttgccgctgctggtggtccccggggtcgaggcggacgacgtgatcggcaccctgtcg
acccaggccgcggccctgggtctgccgaccctgatctcgaccggggacaaagatctggcg
cagctggtcgatgagcacgtcaccctggtcaataccatgaccgggacctggctcgatccg
gcaggggtgcgcgaaaagttcggtgtaccgcccgaacgcatcgtcgattatctggccttg
atgggcgatagtgtggacaacatcccaggcgtacccgggtgtgggcccaagacggcggcc
aaatggctcaccgattacggcgatctcgatggggtcatcgctcaggccgcctccatcaag
ggtaagatcggcgagtcgttgcgcacggcactcgaccagttgcccctggcgcgcgaactc
ctgaccatcaagcgcgatgtcgccctcgacttcggtccgaccgatctgcgaccgaccccg
ccagacattgcgaccctgcgcgcctggtacgaacgtctggaactgcgccgtctgttggcc
accctcgatgggatgggggtcgcaggcgcaccgcccacccagaggcatcagaccggtcac
gaaccccagtacgagctggtcctgaccgagtccgccctggaggcgtggctggcgcggctg
cggacggccgagctcatcgccctggacaccgagaccaccgcgctcgatgcccggcgggcc
gagctcgtcggtatctcgtttgcggtagcacccggccaggcggcctatgtcccgctcgcc
catacctatccgggcgcgccccagcagctcgaccgcgacctggtcctggcgcgattgaaa
ccggtgctggaagaccccgaccgccccaaggtcggccaaaacctcaagtacgacctcacc
gtgctcgcccgctatgggatcgagctgcacgggatcgcccacgacaccctgatcgcgagc
tatgtgctcgatagcaccgcgcgccacgatctagactcgctggccaagcgctttctcggc
catgacaccatccgtttcaaggacgtcgccggcacaggcagcaaacagatccggttcgat
caggtccccctagaacaggccggtccctatgccgccgaggatgccgaggtcacactccga
ctgcaccaggtcttgcaaccgcgcctgacggcggtgcccaaactcgaacggctctatcgc
gagatcgagatgccattggtgcctgtgctcgcgcgtctggaacgcgccggggtgctgatc
gacgccgagcagctcgaatcccagagcgccgaactggcgcgccggatcctcgaattggag
gagacggcccagcgggttgcgggccggcggttcaatctcggctcgcccaagcagatcgcg
gcgctcttgttcgaggaactggggttgccggtggtcgccaagacgcccaagggtgccccc
tcgacctccgaggaggtgctcgaacagctggcccaagtccacgagctgccccggatcatc
ctcgaacaccgcctcctctccaagctcaaatcgacctataccgacaagctaccacgcctg
atcgaccccgccactgggcgcatccatacctcttatcatcagacggtcacggccaccgga
cggctgtcgtcgagcgatcccaacctccagaacatcccgatccgcaccgaggaaggacga
cgcatccggcgtgccttcatcgccgcacccggtcatcgtctgctcgcggccgactattca
cagatcgagctgcggatcatggcccacctctcgggcgatgcccgtctgctcgccgccttc
gccgcgggtttggacatccatcgtgccaccgccgccgagatcctgggtctggcgcccgag
gcggtgaccagcgagcagcgccgttcggccaaggcgatcaatttcgggctcatctatggc
atgtcggcgttcgggctcgcccatcagctcgggatcgagcgtgcagcggcccaggcctat
gtcgagcgctatttcgagcgctatcccggggtgcgcgagttcatggaacgcatccgtcac
caggcacgcgaatgtggctatgtcgagaccctgtttggtcgtcgcctgcatctgcccgag
attggtcacagcaaccagacccgccgcgccgccgctgagcggaccgctatcaatgcaccc
atgcagggtacggccgccgacatcatcaagcgtgccatgatcgcagtcgatgtctggatc
gagacgacaggggcgccggcccgactcatcctccaggtccatgacgaactggtgctggag
gtcgccgagaccgcacttgaggagacccgtgaggcggtgcgcgcggcgatggagggggcc
gccgagctcgccgtgcccctggtggtcgagatcggcagcggcgccaactgggatgacgcc
cactga
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