Thermochromatium tepidum: E6P07_04870
Help
Entry
E6P07_04870 CDS
T06573
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
ttp
Thermochromatium tepidum
Brite
KEGG Orthology (KO) [BR:
ttp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ttp03036
]
E6P07_04870 (smc)
Chromosome and associated proteins [BR:
ttp03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
E6P07_04870 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
AAA_29
OVT1
ABC_tran
COX5A
DUF6213
BLOC1_2
Motif
Other DBs
NCBI-ProteinID:
QGU32381
UniProt:
A0A6I6DXS1
LinkDB
All DBs
Position
1049391..1052903
Genome browser
AA seq
1170 aa
AA seq
DB search
MRLERVKLAGFKSFVDPTTVYFPSNLVGIVGPNGCGKSNIIDAVRWVMGESSAKLLRGES
MADVIFNGSAGRKPVGVASIELIFDNSDGGAGGEYAAFNQISVKRQVTRDGQSSYFLNGA
RCRRRDIQDLFLGTGLGPRSYAIIEQGMISRLIEARPEDLRLFLEEAAGISKYKERRRET
ENRMRHTRENLDRLDDVRDEVGKQLLHLELQAATAEKYTQLRAEERRLDLELKALRWRAL
DDELQALSRRLAEAETQVESGLAEQRRLEVEIESRREAYNAASEEFNAIQGRYYAVAAEI
ARAEQAIRFANEEQGRLRGELKRLDQELYEATQHLERDRERLAEIERALAEDEPQLKQAE
SELTEATVALMTLEDRLQSWESEWEALNIESAHPAEQAQLERARLKALEQAQGRERERRL
RIEGERARLDDSDVSARLEALGERESVLDARIAALEVERDTLLKSLAEHDSALRTLADTL
DQVRTRLREAKGRLAALAALQETALADTDVERRDWLARHGRAGAARLFERLRVEPGWERA
VEVRLGAALRALTVETLETITAETDALPPGLVLLETAGDLVPDPEPETGYWRLSRRVQSP
WPISGLLGPTHTVAHLSEALAARHQLSQDATLITPEGIEVGRHWLRVPERDGTFGVLERA
ETIAALESELAALADEEAEWREEEIERRAARTRSEQRRRALESELTALGLERSALRAELS
ALRTRVEHESERRRALDEEWAELERQSAEVLAEMEDARERLHDWLDQMETLAERRVGLEQ
ERTRLRAQVAASREHERACRDRAQALRIRVESNQAARAATLQSQTRAQAQQTQLLERRDA
LIAALETGVEPLAEERERLRAHLARQVEIEDALQAARRRRESLETEVRALEQERQRVEQR
LQGHQHALDALRLERQERLVRQRTLEEQCAELGTSPGAVLEALDPAATESVWQEELSRVV
ARLQRLGAVNLAAVEEFKALSERKAYLDAQHDDIARALETLEQAIRKIDRETRRRFKETY
EQVDRSFQQLFPRLFGGGQAYLELTDADLLETGVSVMARPPGKRNSSIHLLSGGEKALTA
VALVFAIFQLNPAPFCMLDEVDAPLDDANVGRFCELVRAMSEQVQFIFISHNKVTMEIAH
HLIGVTMHEPGVSRLVSVDVEEAVRLATQG
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgagactcgagcgcgtcaagctcgccggcttcaaatccttcgtcgatcccacgaccgtc
tactttcccagcaatctagtcggtatcgttggcccgaacggttgcggcaagtccaatatc
atcgacgcggtacgttgggtgatgggcgagtcctcggccaagctgctgcgcggtgagtcc
atggccgatgtcatcttcaacggcagcgccgggcgcaagccggttggcgtggccagcatc
gagctgatcttcgacaatagcgacggcggggctgggggcgagtacgcggccttcaatcag
atctcggtcaagcgtcaggtcacgcgcgacggtcaatctagctacttcctgaacggcgcc
cgctgtcggcgccgcgacatccaggatctgtttctcggcacgggactcgggccgcgttct
tacgccatcatcgagcaggggatgatctcgcgcctcatcgaggcgcgtccggaggatctg
cggctgtttctggaggaggccgcggggatctccaagtacaaggagcgtcggcgcgagacc
gaaaatcggatgcgccatacccgcgagaatctcgaccggctcgatgacgtgcgtgatgaa
gtcggtaagcagctgctgcatctggagcttcaggcagcgacggccgagaaatatactcag
ttgcgcgccgaggaacgtcggctggatctggaactcaaggcgttgcgctggcgtgcgctc
gacgacgaactccaggcgttgagccgacgtctggccgaggccgagacccaggtcgagtcc
ggtctggccgaacagcggcggctagaggtcgagatcgagtccagacgcgaggcgtacaac
gccgcttccgaagagttcaacgcgatccagggacgctattacgccgtcgctgccgagatc
gcccgcgctgagcaggccatccggttcgccaacgaggagcagggtcggcttaggggcgag
cttaagcggctcgatcaggagctctatgaagccacacagcatctggagcgcgatcgtgaa
cgcctggccgagatcgagcgcgcgctcgccgaggacgagccgcagctcaaacaggccgag
tccgaactaacggaggcgacggtcgcgctcatgacgctcgaggaccggctccagtcctgg
gagtccgaatgggaggccttaaacatcgagtccgcgcacccagccgagcaggcccagttg
gagcgggctcggctcaaggcgctggagcaggcccagggacgcgagcgcgagcgtcggctc
cggatcgagggggagcgcgcgcgcttggatgactcggacgtctcggcacggctggaagca
ttgggcgagcgcgaatccgtgctcgacgcgcggatcgccgcactggaagtcgaacgcgac
acgctgctcaaatccctggccgagcatgactcagcactgcgcacgctggccgacacgctc
gatcaagtccgcacccgtctgcgcgaagccaagggacgtctggccgcgttggcggcgctc
caggagacggcgctggccgataccgatgtcgaacgccgcgactggctggcgcgccatgga
cgcgcgggcgcggcgcgtctgttcgaacggctcagggtcgaacctggctgggagcgcgcg
gtcgaggtccggcttggggcggccctgcgcgccctgacggtcgagacactggagacgatt
acggcagagacggacgccttgccgcccggtctggtgttgctcgaaacggcgggcgatctc
gtcccggatcccgagcctgagaccggatactggcggctcagccggcgtgtccagtcgccc
tggccgatcagcggactgctcggcccgacgcacacggtcgcccatctgtctgaggccctg
gcggcccgtcatcaactgagccaagatgcgaccctgatcacgcccgagggcatcgaggtc
ggtcgtcactggctgcgtgtcccggagcgcgacgggaccttcggcgtgttggagcgcgcc
gagaccatcgctgcgctcgaatccgaactggccgcacttgccgacgaggaggccgagtgg
cgcgaagaagagatcgagcggcgcgccgcgcgcacccgttccgaacaacgccggcgcgcg
ctcgaatccgagctgaccgccctggggcttgagcgctcggccctgcgcgccgaactgagc
gccctgcgcacgcgcgtcgagcatgagtccgagcgtcggcgcgcgctcgacgaggaatgg
gccgagctggaacgccagagcgccgaggtgctcgccgagatggaggacgcgcgcgagcgt
ctgcatgactggctcgatcagatggagaccctggccgagcgccgggtcgggctggagcag
gaacgtacccgtctgcgcgcccaggttgccgcaagccgcgagcacgaacgcgcctgccgc
gaccgggcgcaagccctgcgcatccgggtcgagtccaaccaggccgcgcgcgcggcaacc
ctgcaaagtcagacccgcgcccaggcccagcaaacccagttgcttgaacgccgcgatgcc
ctgatcgccgcactggaaacgggcgtcgagccgctggctgaagagcgcgaacgactcagg
gcgcatctggcgcgccaggtcgagatcgaggacgcattgcaggccgcccgccgccggcgc
gagtcgctggagaccgaggtccgcgcgctggagcaggagcgccagcgcgtcgagcagcga
ctccagggccatcagcatgcactggacgccctgcgtctggaacgccaggaacgcctggtc
cgccagcgcacactggaggagcagtgtgcagaactcggtaccagcccgggcgcggtcctg
gaagcgctcgacccggcggcgaccgagtccgtctggcaggaagaattgagcagggttgtc
gcccgcctccagcgtctgggcgcggtcaacctggcggcggttgaggaattcaaggcgctc
tccgagcgcaaggcctatctcgacgcccagcacgatgacatcgcccgggcgctggagacc
ctggagcaggcgatccgcaagatcgaccgcgagacccgccgtcgcttcaaggagacctac
gagcaggtcgatcggagcttccagcagctctttccgcgtctgttcggcggcggccaggcc
tacctggaactgaccgatgcggatctactggagacaggcgtcagcgtcatggcgcgtccg
cccggaaagcgcaactccagcattcatctgctctcaggcggcgagaaggccttgaccgct
gtggccctggtgtttgccatcttccagctcaatcctgcacccttttgtatgctcgacgag
gtcgacgccccgctcgatgatgccaacgttgggcgtttctgcgagctggtgcgcgcgatg
tcggaacaggtgcagttcatcttcatcagtcacaacaaggtgacgatggagattgcacac
cacctgatcggtgtgaccatgcatgagcctggtgtgtcgcgtctggtcagcgtcgacgtc
gaggaggcggtgcgtctggcgacccagggttga
DBGET
integrated database retrieval system
