Thermochromatium tepidum: E6P07_06465
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Entry
E6P07_06465 CDS
T06573
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
ttp
Thermochromatium tepidum
Pathway
ttp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ttp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E6P07_06465 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttp03400
]
E6P07_06465 (uvrB)
DNA repair and recombination proteins [BR:
ttp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E6P07_06465 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E6P07_06465 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
AAA_16
AAA_30
UB2H
AAA_25
LIN52
Kinesin
Motif
Other DBs
NCBI-ProteinID:
QGU32657
UniProt:
A0A6I6EH89
LinkDB
All DBs
Position
1407302..1409320
Genome browser
AA seq
672 aa
AA seq
DB search
MSNPSSLAFELVSPFAPAGDQPEAIRRLIEGLNDGEAGLTLLGVTGSGKTFTIANVIAQV
QRPALILAPNKTLAAQLYGEMREFFPRNAVEYFVSYYDYYQPEAYVPATDTYIEKDASIN
EHIEQMRLSATKALLERRDVIIVATVSSIYGLGDPEAYLKMVLILKRGERIDQRAILRRL
AELQYTRNEIELARGTYRVRGDVIDIHPAESDNEALRITLFDDEIETLSLFDPLTGEARR
QVSRYTVFPKTHYATPRETILKAVDLIKSELKERLEWLRANGKLVEAQRLEQRTLFDLEM
MLEVGYCQGIENYSRYLSGRQPGEPPPTLYDYLPPDAILIIDESHVTVPQLGGMYRGDRS
RKETLVEYGFRLPSALDNRPLRFEEFRARQPQTIYVSATPRAFEIEHSGAVIEQLVRPTG
LVDPELEVRPASTQVEDLLSEIGPRLAVGERVLVTTLTKRMAEDLTQYLDAHGVRVRYLH
SDIDTVERVEIIRDLRLGVFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTDSLIQ
TIGRAARNANGKAILYADRVTESMRRAIVESERRRAKQIGANRARGITPQTIRKAVADIL
EAHTPGAPLPAREYAKVAEQMAEYGRLTPQQLAKRIKALEKQMYQHAKDLEFEQAAAIRD
QIRALQRQGLAA
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatccgtccagtctcgccttcgaactcgtcagtccctttgccccggccggcgat
cagcccgaagccatccgccgtctgatcgagggcctaaacgacggcgaggctggtctaaca
ctgctcggcgtgaccggttcgggcaagaccttcaccatcgccaatgtcatcgcccaggtg
cagcgcccggcgctcatcctcgcgcccaacaagacgctcgccgcccagctctatggcgag
atgcgcgagttcttcccgcgcaacgcggtggagtatttcgtctcctattacgactactac
cagcccgaggcctatgtcccggcgaccgacacctatatcgagaaggacgcgtcgatcaac
gagcatatcgagcagatgcgcctgtcggcgaccaaggcgctgctcgagcggcgcgacgtc
atcattgtcgccaccgtttcctctatctatggtctgggcgatcccgaggcctatctgaag
atggtgttgatcctcaagcgcggcgagcgcatcgaccagcgcgccatcctgcgccgactc
gccgagctgcaatacacccgcaacgagatcgaactggcgcgcggcacctatcgcgtgcgc
ggcgatgtgatcgacatccacccggccgagtccgacaatgaggcgctgcggatcaccctg
ttcgatgacgagatcgagactttgtcgctgttcgatcccctgaccggcgaggcacggcgt
caggtctcgcgctacaccgtgtttcccaagacacactatgccacgccacgcgagaccatc
ctcaaggccgtcgatctcatcaagtcggaactcaaggaacggcttgagtggttgcgcgcc
aacggcaagctggtcgaggcccagcggctcgagcaacgcaccctgttcgatctggagatg
atgctggaggtcggctactgccaggggatcgagaactacagccgctatctctctgggcgc
cagccgggcgagccgccaccgaccctctatgactatctgccgcccgatgcgatcctgatc
atcgatgagagccatgtcaccgtaccccagctcggcggcatgtatcggggcgatcgctcg
cgcaaggagaccctggtcgaatatggctttcgtctgccctcggcgctcgacaaccgtccg
ctccgcttcgaggagttccgggcacgtcaaccgcagaccatctatgtctcggcgaccccg
cgcgcctttgagatcgagcactcgggtgcggtgattgaacagctggtgcgcccgactggt
ctggtcgatcctgaactcgaggtgcgcccggcgtcgactcaggtcgaggatctgctgtcc
gagatcggtccgcgcctggccgtcggtgaacgggtgctggtgacgacgctcaccaagcgc
atggccgaagatctcactcagtatctcgacgcgcacggcgtccgggtccgctatctgcac
tcagacatcgacaccgtcgagcgggtcgagatcatccgcgatctacgactcggggtcttc
gatgtgctggtcgggatcaatctgctgcgcgaaggtctggacatgcccgaggtgtctttg
gtcgcgatcctggatgccgacaaggagggctttctgcgttcgaccgattcgctgatccag
accatcgggcgggcggcgcgcaatgccaacggcaaggcgatcctctatgccgaccgcgtc
accgagtcgatgcgacgcgccatcgtggagagcgagcgccgccgcgccaagcagatcggg
gcgaatagggcccggggcatcacgccccagaccatccgcaaggcggtcgccgatatcctg
gaggcccatacccctggcgcgccgctgccggcgcgtgaatatgccaaggtcgccgagcag
atggccgaatatggtcgcctcacgccccaacagttggccaagcgcatcaaggcgctggag
aaacagatgtaccagcacgccaaggatctggagttcgagcaggccgccgccatccgcgac
cagatccgcgccttgcagagacaggggttggcggcatga
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integrated database retrieval system
