Thermochromatium tepidum: E6P07_07140
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Entry
E6P07_07140 CDS
T06573
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ttp
Thermochromatium tepidum
Brite
KEGG Orthology (KO) [BR:
ttp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ttp03009
]
E6P07_07140
Enzymes [BR:
ttp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E6P07_07140
Ribosome biogenesis [BR:
ttp03009
]
Prokaryotic type
rRNA helicases
E6P07_07140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
QGU32773
UniProt:
A0A6I6E7Z4
LinkDB
All DBs
Position
1574851..1576215
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AA seq
454 aa
AA seq
DB search
MNTHFSEFLLPDALMRGLADAGYTTPTPVQAQVIPLAMEGLDLLVSAATGSGKTAAFLLP
IMQRFIEGPRHDGGTRALILVPTRELARQIHDHFMRLGRYTRLTCGVITGGASKAHQIAT
LRKDPEILVATPGRLLEFLETGQADLSDLEFLVLDEADRMLDMGLAGDVLAIIRYSRPER
QSLLFSATLKQRGLNRIIAHLLRDPRRVDIDPIRQQHPDIAHWLFLSDGLEHKQQQLLWL
LRHETYDKALIFTNTREGAVALGNFLQGQQQRVAVLHGELDQRERNRVMGLWHSGRVNTL
IATDLAARGLDVPGVQRVFNFDLPRRGDDYLHRTGRTGRAGETGVAISLVGPPEWNRMES
ITRYLNLTFELREIPGLKANFKGPVKRKKPTKPAKTRNKCTSRALVGAKQRKKERLRDRK
NIGKRRVPSSVKAQEAGHAPLTRHLREDAKSGKD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacacttctctgagtttctccttcccgacgcgctcatgcgcggtctggccgac
gcaggctatacgacaccgaccccagtccaggcccaggtgatcccgctggcgatggagggc
ttagatttgctggtctcagcggccacgggctccggcaagacggcggcctttctgctgccg
atcatgcaacgcttcatcgaagggccgcgccatgatggcggcacccgcgccctgatccta
gtgccaacccgcgagctggcacgtcagatccatgaccatttcatgcgtttgggccgctat
acgcgcctgacctgcggcgtcatcaccggtggcgcgtccaaggcccatcagatcgcgacc
ctgcgcaaggatcccgagatcctggtggccaccccggggcgtctgcttgaatttctggag
acgggacaggcggatctgagcgacctggagttcctggtgctcgacgaggccgaccggatg
ctcgacatgggcctcgccggcgacgtgctggcgatcatccgctacagccgtcccgagcgc
cagtcactcctgttctcggcgacgctcaagcagcgcggtctgaatcggatcatcgcgcat
ctgcttcgtgatccgcggcgggtcgatatcgatccgatccgccaacagcacccggacatc
gcgcattggctgtttctgagcgacggactagaacacaagcaacagcagcttctgtggttg
ctgcgtcacgaaacctatgacaaggccctgatcttcaccaacacccgcgagggggccgtg
gcgctaggcaacttccttcaaggccaacagcagcgggtcgccgtgctgcacggcgaactc
gatcaacgcgagcgcaatcgcgtcatggggctgtggcatagcgggcgtgtgaatacgctc
atcgcaaccgatctggccgcacgcggactcgatgtgccgggtgtgcagcgggtattcaat
tttgacttgccgcgccggggcgatgactatctgcatcgtaccggacgtaccggacgcgca
ggcgagaccggcgtggctatctcgctggtcggtccacctgaatggaaccggatggagagc
atcacgcgctatctcaacctaaccttcgagctgcgcgagatcccgggactcaaggccaac
ttcaaagggccggtgaagcgcaaaaaaccgactaaaccggcgaagacacgcaataagtgc
acatctagggccttggtcggggcgaaacagcgcaagaaggaacgtctacgcgaccgcaag
aacatcggcaagcggcgtgtgccgtcgagtgtcaaggcgcaggaggcgggtcatgcgcct
ctgacgaggcacttacgcgaggatgccaagtcgggcaaggattga
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