Thermochromatium tepidum: E6P07_09010
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Entry
E6P07_09010 CDS
T06573
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ttp
Thermochromatium tepidum
Pathway
ttp03030
DNA replication
ttp03430
Mismatch repair
ttp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ttp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E6P07_09010 (holB)
03430 Mismatch repair
E6P07_09010 (holB)
03440 Homologous recombination
E6P07_09010 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttp03032
]
E6P07_09010 (holB)
03400 DNA repair and recombination proteins [BR:
ttp03400
]
E6P07_09010 (holB)
Enzymes [BR:
ttp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E6P07_09010 (holB)
DNA replication proteins [BR:
ttp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E6P07_09010 (holB)
DNA repair and recombination proteins [BR:
ttp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E6P07_09010 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_16
RuvB_N
AAA_22
SoxY
Motif
Other DBs
NCBI-ProteinID:
QGU33102
UniProt:
A0A6I6E5J2
LinkDB
All DBs
Position
complement(1968410..1969465)
Genome browser
AA seq
351 aa
AA seq
DB search
MSATRRESAPLHVAGPSPRAFERPLPWTESIWSHLHAARASGRLAQGLLIFGPNGLGKRV
LARALAQSLLCPTPNVQGLACGRCADCRLLAAGSHPDLIAVGPDPESKSGEIPIDAVRQF
AERESLTPSRAPYKVALIDPADRLNQAAANALLKTLEEPTEHSLLCLIAERIGRLPATIR
SRCLLIQVPIPDEAAALSWLASREPRPDWPLRLRLAHGAPLRALADSADDTWMEQRVQCL
RDFLEIARGRADPVAVVGRWNEIDTGRILDWLAGVMVDLLRLGVCATPPRLDHPDRRDEL
LALAQGLDLAAGHRFLKRILEARALGERNLNQQLLLESLAIDWARITSRHH
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaacgcgccgcgaatccgcgccattgcacgtcgctggaccttcgccgcgagcg
ttcgagcgtccattgccctggaccgagtccatctggtcgcatctgcacgccgcgcgcgca
tccggtcgactggcacaggggctgctgatctttgggccaaacggcctcggcaagcgtgtg
ctggcgcgtgcgttggcccaatcgctgttatgcccgacaccgaacgtccagggcctggcc
tgcggtcggtgtgccgactgtcggctgctagccgccggcagccatcctgatctgatcgca
gtcggcccggacccggagagcaagtcgggcgagatcccgatcgacgcggtacgccagttc
gccgagcgcgaatccctgaccccgagccgtgccccctacaaggtcgccctgatcgacccg
gccgaccggctcaatcaggccgccgccaatgccttgctcaagaccctagaagaaccgacc
gaacacagtctgctgtgtctgatcgcggagcggatcggacgcctgccggcgaccatccgg
agtcgctgtctgctgatccaggtgccgattccggacgaagcggcggccctgagctggctc
gcctcacgcgaaccgcgcccggactggccgctgcgtctgcgtctggcgcatggcgcaccc
ttgcgcgccctggccgacagcgccgacgacacctggatggaacagcgtgtccagtgtctg
cgtgacttcttagagattgcgcgcggacgcgccgatccggtcgcggtcgttggacgctgg
aacgagatcgacaccgggcgtatcctcgattggctcgccggcgttatggtggatctgctt
cgactgggcgtctgcgccacaccgccccggctcgatcatcccgatcgacgagacgaactc
ttggcgctggcgcaagggctcgacctggcggcggggcatcgcttcctcaagcggatcctg
gaggcacgcgccctgggcgagcgcaatctcaatcaacagttgctgctggaatccctcgcc
attgattgggcgcggatcaccagtcggcatcattag
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