Thermochromatium tepidum: E6P07_09535
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Entry
E6P07_09535 CDS
T06573
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
ttp
Thermochromatium tepidum
Pathway
ttp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ttp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E6P07_09535 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ttp03000
]
E6P07_09535 (nifA)
Transcription factors [BR:
ttp03000
]
Prokaryotic type
Helix-turn-helix
Other families
E6P07_09535 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF_2
GAF
AAA_5
Mg_chelatase
AAA_2
AAA
HTH_23
AAA_3
Parvo_NS1
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QGU33194
UniProt:
A0A6I6E013
LinkDB
All DBs
Position
complement(2071903..2073414)
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AA seq
503 aa
AA seq
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MSEGASIETLYRVSEVLSRSLDYRQTLREVLDVLAEAGLGHGLISVIAGDGDELAITMLQ
GAPDATRFAPVRYQSGEGVLGSVFERGTTLAVPRLGHDPRFLNRLGIYDPERPLIATPIT
ANGRTLGVLAVQPEAVSGLEAQTRFVEMIANLIGQNVRLALEVDQERQWIADERDALRRT
LRSRYGFENIVGRSIGMRRVFEQVRLVAKWNTTVLIRGETGTGKELIASAIHYNSPRARG
PYVRLNCAALPENLLESELFGHEKGAFTGAIGTRKGRFEAADSGTLFLDEIGEISPSFQV
KLLRVLQEGEFERVGSTRTLKVDVRVIAATHRDLESAVASGQFREDLYYRLNVMPIVLPP
LRERSEDIPDLARHLIEQIAKQQGRPLVLHEGAIRRLMQYSWPGNVRELENCLERAAVMS
ENGSIGAELIQLGRAPAAQPVRATPTNDLKTDSDVGEPSERERIIAALEKAGWVQAKAAR
LLGMTPRQIAYRIQTLGIEVKQF
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagggggctagcatcgagaccctgtaccgggtcagcgaggtattgtcgcgctcg
ctcgactatcgccagaccctgcgcgaggtcctggatgtcctggccgaggccgggcttggt
cacgggctgatcagcgtcattgcgggcgatggcgacgagctggcgatcaccatgcttcag
ggggcccctgatgccacgcgctttgcccctgtccgctatcaaagcggcgagggggtcctg
gggtcggtgtttgaacgcggcacgaccctggccgtaccgcgcctggggcatgacccacgt
ttcttgaatcgtctggggatctatgacccagagcgccccctgatcgcgacacccatcacg
gccaatggccggacactcggggtacttgccgttcaacccgaggcggtgagcgggctcgag
gcccagaccaggttcgtcgagatgatcgccaacctgatcggtcagaacgtgcggcttgcg
ctcgaggtcgatcaggaacgccaatggatcgccgacgagcgcgacgccttgcgccgcacc
ctgcgcagtcgttatggcttcgagaatatcgtcgggcgctcgatcgggatgcggcgggtc
ttcgaacaggtgcgcctggtggccaagtggaacaccacggtgctcatccgcggcgagacc
ggtaccggcaaggaactgatcgccagcgccatccattacaactcgccgcgtgcccgcggc
ccctatgtccggctcaactgcgccgccctacccgaaaacctgctcgagtccgagctcttt
ggccacgaaaagggggcctttaccggtgcgatcggcacgcgcaagggacggtttgaggcc
gccgatagcgggaccctgttcctcgatgagatcggtgagatctcgccgagtttccaggtc
aagctattgcgcgtgctccaggaaggggagttcgagcgggtcggcagtacccgcaccctc
aaggtggatgtacgggtcatcgcggccacccatcgcgaccttgagtccgccgtggcctcg
ggacagttccgggaggatctctattatcggctcaatgtcatgcccatcgtgctcccaccc
ctgcgcgaacggagcgaggacatcccggatctggcgcgtcatctgatcgagcagatcgcc
aaacaacaggggcggccactggtgctgcacgagggggccatccgccgtctgatgcaatat
tcttggccgggaaatgtgcgcgagctggaaaactgtctcgaacgggcggcggtgatgtcg
gagaacggttcgattggtgccgaactgatccagctcgggcgcgcacccgcggcccagccg
gtccgggcgacgccgaccaatgaccttaagacagactcagacgtgggagagccgtctgag
cgcgaacgcatcatcgctgcgctcgaaaaggccggctgggtccaggccaaggcggcgcgc
cttttggggatgaccccgcgccagatcgcctatcgcatccagacgctcggcatcgaggtc
aaacagttttga
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