Thermochromatium tepidum: E6P07_10015
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Entry
E6P07_10015 CDS
T06573
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ttp
Thermochromatium tepidum
Brite
KEGG Orthology (KO) [BR:
ttp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttp03032
]
E6P07_10015
03400 DNA repair and recombination proteins [BR:
ttp03400
]
E6P07_10015
Enzymes [BR:
ttp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
E6P07_10015
DNA replication proteins [BR:
ttp03032
]
Prokaryotic type
DNA Topoisomerases
E6P07_10015
DNA repair and recombination proteins [BR:
ttp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E6P07_10015
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
HATPase_c
Intein_splicing
LAGLIDADG_3
Toprim
GyrB_hook
HTH_31
HTH_3
HATPase_c_3
GspL_C
Motif
Other DBs
NCBI-ProteinID:
QGU33282
UniProt:
A0A6I6E617
LinkDB
All DBs
Position
2176170..2180291
Genome browser
AA seq
1373 aa
AA seq
DB search
MTYDSTNIKVLRGLDAVRKRPGMYIGDTDDGTGLHHLVFEVVDNSIDEALAGYCTKITVI
LHTDGSVSVIDNGRGIPVDIHAEEQRSAAEVILTVLHAGGKFDDSSYKVSGGLHGVGVSV
VNALSERLYLRIRRGGHIHEQEYRLGEPLYPLRVVGDTEETGTEIRFLPSGEIFSNREFH
YDILAKRLRELSFLNPGVCITLSDEQSGRQDVFEYEGGIRAFVESLNQNKEPLHPTVIYF
SAERQNIGIELAIQWNSGYQETIFCYTNTIPQRDGGTHLAGLRAALTRTLNGYIEREGLD
KNQKIRPIGDDAREGLTAVLSVKVPDPKFSSQTKDKLVSSEVKAVVESLVVEHLGTFLEE
HPTEAKAIAGKILEAARAREAARKAREMTRRKGVLDIAGLPGKLADCQERDPAKSELYLV
EGDSAGGSAKQGRDRTFQAILPLKGKILNVEKARFDKMLSSAEVGTLITALGCGIGREEY
NPDNLRYHRVIIMSVDAEEHVFVRDPGGHVRMTRIGDFIDAALPEEASGDDYCKRADADL
GEVLCFGMKDRLTRFRPIKAVIRHPLHEPLYEVKSAYGRSVRVTASHSVFVYADQQIKLK
RGDELREGDRIVAPRSLSFPVTAPERLDVLSALHAIPEAAAQIWVRGAAVEDFHKARVLA
QYADDAELISPRVELPIAVGAEVAALRRASGQTVRSLCKQIGIRQPVTIHAWESGRSRPR
LDRWVAYLEAVGADVDRIMDQVKVVPGRLEQTWATPYRGAPANQVRPYVRLSDLDGKAVS
GFGTRTDLELTPKPYADRGMARFIKVNADLLWLLGFYLAEGSCSERGGIRFAIGARNQAI
LPELRRVLEQTFGLQAQVYTNQDRVTELRLTNRVAVLAWRHLFGFTNTNAIDKAIPDLVF
SVDEPLRLAFIRGYLQGNGTLAAGRLGFATSSRDLASGLSYLLSSFGVVASLSHYEPDGV
VREIRGQPCVTRHPRWSLTVSAREDLARLRAVWADLPGAEALDERLQSTAPSVNRRFETL
DGDLIALPIESITPVEASNGQVYDFSVEDDENFIAGLGGLCCHNTDADVDGAHIRTLLLT
FFYRQMPELIERGHVYIAQPPLYKLKKGKQEDYLLDEAALTAAMLQAALEEAEFHVNADA
PPLASTAFEALAKEYQVAVSIVRRLASRYDASFLDELVHMPPVDAAILSEDERLAEWCRI
MEARLNAAESVSRRYVLRLSAPTEGSQSRRLELIRLIHGIPETRHIPLDFFHTADYARLR
EFGLKLDGLVQPGAFVRRGERTKTIRDLGEGIRWLLAEAQRGYSLQRYKGLGEMNPEQLW
ETTMNPETRRLLRVTIEDAVAADQIFTTLMGDQVEPRREFIERNALNVGNLDI
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgacctacgactccacgaacatcaaggttctccgcggattggatgcggtgcgcaagcgc
ccgggtatgtatatcggggatacggacgatggcacgggtcttcatcacctggtcttcgag
gtcgtggacaactcgatcgacgaggcgctcgccggctattgcaccaagatcacggtcatc
ctgcacacggatggatcggtctcggtgatcgataacgggcgtgggatcccggtcgatatc
catgccgaggagcagcgctcggccgccgaggtcatcctcacggtgctccatgccggcggc
aagtttgacgacagctcctacaaggtctcgggcggtctgcacggtgtgggggtgtccgtg
gtcaacgcgctctcggagcgtctgtatctgcgcatccggcgcggtggacacatccacgaa
caggaataccgtctcggcgaacccctgtatcccttgcgcgtcgttggcgacactgaggag
acagggaccgagatccgtttcctcccctcgggtgagatcttctccaaccgcgagtttcac
tacgacatcttggccaagcgactgcgcgagctgtctttcttgaatccgggtgtatgcatc
accctgagcgacgagcagagcgggcggcaggatgtcttcgagtatgagggtggcatccgc
gccttcgtcgagtcactgaatcaaaacaaggagccgctccacccaaccgtcatctatttc
agcgccgaacgccagaacatcggcatcgagctggcgatccagtggaacagcggctatcag
gagaccatcttttgctacaccaataccatcccgcaacgtgacggcggcacccatctggcc
ggtctgcgcgcggcgctcacgcgcacgctcaacggttatatcgagcgcgaaggcttggat
aagaatcagaagatccgcccgatcggagacgatgcgcgcgaggggttgacggcggtactc
tcggtcaaggtgccagaccccaagttctcgtctcagaccaaggacaagctggtctcctcc
gaggtcaaggccgtggtcgagtcgctggtggtcgagcatctagggacattcctcgaggag
catcccaccgaggccaaggcgatcgccggcaagatactcgaggccgcgcgggcgcgggag
gcggcgcgcaaggcgcgcgagatgacccggcgcaagggcgtactcgacatcgccgggctt
ccaggcaagctcgccgactgtcaagaaagggatccggccaagtccgagctctatctggtc
gagggcgactcggctggcggctcggccaagcagggtcgcgatcgcacctttcaggcgatc
ctgccactcaagggcaagatcctgaacgtcgagaaggcccggttcgacaagatgttgtcc
tcggccgaggtcggtaccctgatcaccgcgctcggctgcggtatcgggcgcgaggaatac
aacccggacaatctgcgttatcaccgcgtgatcattatgagcgtcgatgccgaggagcac
gtcttcgtgcgcgatccgggcgggcacgtgcgcatgacccgtatcggcgacttcatcgac
gcggccctacctgaagaagcgtctggcgacgactattgcaaacgcgccgatgccgacttg
ggcgaggtgctgtgcttcggcatgaaggatcggctgacccgcttccgccccatcaaggcc
gtgatccgtcatccgctccacgagccgctctatgaggtcaaatcggcctatggtcgctcg
gtgcgggtgacggccagccacagtgtctttgtctacgctgatcagcagatcaagctcaag
cgcggcgatgagctgcgcgaaggcgatcgaatcgttgcgccccgttcgctatcgttcccg
gtgacggcgcctgagcgtctcgatgtcttgagtgcactgcatgccatccctgaagccgct
gcacagatttgggtgcgcggtgcggcggtcgaggattttcacaaggcgcgtgtgctggcc
cagtacgctgacgacgccgaactcatctcaccgcgtgtcgaactgccgatcgccgttggc
gctgaagttgccgccttgcgtcgggccagcggtcagaccgtgcgttcgctttgcaaacaa
atcggcatccgtcagcccgtgaccatccacgcctgggaaagcggtcgctccagaccgcga
ctggatcgctgggtcgcctatctggaggccgtcggtgcggatgtggaccggatcatggat
caggtcaaggtcgttccgggccgtctggaacagacctgggcgacgccgtatcgtggtgcg
ccggccaatcaggtgcgtccctatgtcagactgagtgatctcgatggcaaagccgtgagc
ggcttcggtacgcggactgatctagaactgacacctaagccctacgccgatcgaggcatg
gcacgtttcatcaaggtgaacgccgatctgctctggctgctcgggttctatctggccgag
ggatcctgctctgaacgtggcggcatccgtttcgccatcggtgcgcgtaatcaggcaatc
ctgcctgaactgcgccgtgtgctggagcagactttcggcctgcaagcccaggtctacact
aatcaggatcgcgtcaccgaattgcgtctgaccaaccgggtcgcggtgctggcttggcgc
catctgttcggtttcaccaataccaacgccatcgataaagctattccggatctggtgttc
agcgtcgacgagccgctgcgtttggcctttatacgcggctaccttcagggcaacggcacg
cttgccgccggtcggttgggctttgcgacctcctcgcgcgatctggcgagtgggttgtcc
tacctgttgtcgtccttcggcgtcgtggcgtcgctgtcgcattacgagccggatggcgtg
gtccgcgagatccgtggtcaaccctgtgttacacgccatccgcgctggagtttgacggtc
agcgcgcgcgaggatctggcgcgtttgcgcgctgtctgggctgatctaccgggcgccgag
gcgctggatgagcgcctgcagagtaccgcgccttcggtcaaccgtcgcttcgagacactc
gacggcgacctgatcgcattgccgatcgagtccattaccccggtggaggccagtaacggc
caggtctacgatttctcggtcgaggacgacgagaacttcatcgccggtctgggtggactc
tgctgccacaatacggacgcagacgtagacggagcgcatatccgcaccctgctcctgacc
ttcttctaccgccagatgcccgagctcatcgaacgcgggcacgtctacatcgcccagccg
ccgctctacaagctcaagaagggcaagcaggaggattatctactcgacgaggcggcgctc
acggcggcgatgctgcaagcggcgctcgaagaggccgagttccatgtcaacgccgatgcg
ccgccgctggcgagcacggccttcgaggccctggccaaggagtatcaggttgccgtgagt
atcgtgcgccgcttggcatcgcgttatgacgcgagcttcctggatgagctggtccacatg
ccgccggtcgatgccgcgatcctgtccgaggacgaacgcctggccgaatggtgtcggatc
atggaagcccggttgaatgccgccgaatccgtctcacggcgctatgtcctgcgcctcagt
gcaccgactgaaggcagccagtcgcgcagactggaattgatccggctcatccatggtatc
cccgagacgcgccacatcccgctcgatttcttccacaccgccgattatgcccgtctgcgt
gaattcggcctcaagctcgacggcctggtccagccgggtgccttcgtgcgccgcggcgag
cggaccaagacgatccgtgatctcggtgagggcatccgctggttgctggccgaggcccaa
cgcggttatagcctgcaaaggtataaggggttgggcgagatgaacccggaacagctgtgg
gagaccaccatgaatccggagacacggcgtctgctaagggtcaccattgaggacgcggtc
gccgccgaccagatcttcaccaccctcatgggcgaccaggtcgagccgcggcgcgagttc
atcgaacgcaatgcgctgaatgtgggtaatctcgatatttga
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