Thermochromatium tepidum: E6P07_12675
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Entry
E6P07_12675 CDS
T06573
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ttp
Thermochromatium tepidum
Pathway
ttp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ttp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E6P07_12675 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttp03400
]
E6P07_12675 (recD)
Enzymes [BR:
ttp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
E6P07_12675 (recD)
DNA repair and recombination proteins [BR:
ttp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E6P07_12675 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
AAA_22
NAT10_TcmA_helicase
UvrD-helicase
AAA_16
SLFN-g3_helicase
AAA_28
UvrD_C
nSTAND3
T2SSE
NTPase_1
TraI_hel_assoc_N
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QGU34053
UniProt:
A0A6I6EBD8
LinkDB
All DBs
Position
2742672..2744903
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AA seq
743 aa
AA seq
DB search
MIAHDGEGQRALQLEDWDRLGALRPLDLALTRFIRAHGPETDPWVLLAIALTSARTGQGH
ICLDLKAALESPHTLLTAGDADLPASPGPGAELAAWLATLTLDDWVARLTQSSVIEKAWA
SRPPSDTTAAKIAAPQSEPAPLVLGGTPERPLLYLRRYWTYEQRIQAGLSARLHRTLDQP
EDRMRALLEVLFEAEESGTLPWQRIACALAACRAFAIITGGPGTGKTTTVVRLLALLQSL
ALEAGASPLRIRLAAPTGKAAARLNESIAGQVERLPFDRLPDIRPAIPIQAVTLHRLLGP
LPDSRGFRYRAGHPLPADLVVVDEASMLDVELMAALLDALRPEARLILLGDQDQLASVEA
GAVLGDLCRRARAAHYTPKTRDWLERVTGARLPEALIDPAGRPLDQAIVMLRHSYRFRAE
GGIGALAELVNTGRLDGAPVSAPCTALDTLFARRSDPSLGQIRRIRLSDERDPRFDQLVF
TAYWGRSGYLALLHEQRPPDDAPPEAFDAWARAVLRAQAGFQLLTALRQGPWGAEGLNRR
IQHRLSQGPDASSLGARTSTQIQIQGGQPWFEGRPVLVTCNDYRLGLMNGDIGITLRVPV
KSTPPQRWERGQGEGAQPSSVLRVAFPSGDGSDAIRWILPSRLQNVETVFAMTVHKSQGS
EFDHTALILPPVSSPVLTRELLYTAITRAKSVFTLIDTQEEVLCGALGRRVERASGLALA
LDSDQDASLNEDQPSARGGASDS
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgcacgacggggagggacaaagggccttgcagctagaggactgggataggctt
ggcgccctacgcccgctcgatctggccctgacccgattcatccgggcgcatggaccggaa
acggatccctgggtcctgttggcgatcgccctgaccagcgcgcgcaccggtcagggtcac
atctgtctagacctgaaggccgcgctcgaatcgccgcacaccctattgaccgcaggcgac
gcggatctgcccgcgtcgccaggacctggtgccgagctggctgcatggctcgcgaccctg
acgctggacgactgggtggcgcgtctgacgcagtccagcgtgatcgagaaggcctgggcg
tcgcgcccgccatccgacaccactgcggccaagatagccgcgccccagtccgagccggcg
cccctggtcctcggcgggacgcctgaacgcccgttgctctatctacgccgctactggacc
tatgagcaacgcatccaggcaggcctctcagcgcgtcttcaccggacgctcgaccagcct
gaggacaggatgcgcgccttgctcgaggtgctctttgaggccgaggagtccggcacactc
ccctggcaacgcatcgcctgtgcgctggccgcgtgccgtgccttcgccatcatcaccggc
ggtccgggcacaggcaagaccaccacggtcgtgcgtctgctcgccttgctgcaaagcctt
gcgctggaggccggcgcatcgccgctgcgtatccggcttgctgccccgaccggaaaggcg
gcggcacggctcaacgaatccattgccggacaggttgaacgcctgcctttcgaccgactc
cccgacattcgcccagcgatcccgatccaggccgtcaccctgcatcgtctgctcggtccg
ctcccagacagccgcggcttccgctatcgcgccgggcatccgctgccggctgatctggtg
gtcgtcgatgaggcctcgatgcttgatgtcgagctgatggcggcgctcctcgatgcgctg
cgacccgaggcgcgcctgatcctactcggcgaccaggatcaactcgcctcggtcgaggcc
ggtgccgtgctgggcgacctgtgtcggcgcgcccgcgcggcgcattacacccccaagacg
cgcgactggttggagcgggtgacaggcgcgcgcttgcctgaagcgctgatcgatccggcg
ggccgaccgctggatcaagccatcgtcatgctgcgtcacagctatcgctttcgcgccgag
ggcgggatcggcgccctggccgagctggtcaacaccgggcggctggacggcgcaccggtc
agcgcaccctgcaccgccttggataccctctttgctcgccgctccgacccaagtctcgga
cagatccggcggattcgtctgagcgacgaacgcgacccccgcttcgaccaactggtgttc
acggcctactggggacgctcgggctatctcgcactgctgcacgaacagcgcccaccggac
gatgcccctcccgaagccttcgacgcctgggcgcgcgccgtgctcagggcccaggcggga
ttccagctgctcaccgccttgcgccaaggaccctggggggccgagggactgaatcggcgc
atccagcatcgattgagccagggcccagatgcatccagcctcggcgcaaggacatcaact
cagatccagatccaaggcggccaaccttggttcgagggacgcccggtgctcgtgacctgc
aacgactatcgtctgggcctgatgaacggcgatatcgggatcaccctgcgcgtgccggtc
aaatccactcccccccaaaggtgggagagaggacagggtgagggggcgcagccatccagc
gtgctgcgcgtcgccttcccgtccggtgatggcagcgacgccattcgctggatcctgccc
agccgcttgcagaacgtcgagaccgtgtttgccatgacggtgcacaagtcgcagggttca
gagttcgaccataccgccctgatcctgcccccagtctccagtccggttctgacacgcgag
ctgctctataccgcgattacccgcgctaagtcggtcttcaccctgatcgacacccaagag
gaggtgctttgcggggcgctcgggcggcgggtggagcgcgcgagcggactggcgctggcg
ctcgactcggaccaggacgcctctttgaacgaggatcagccgtccgcccggggcggggcg
agcgactcatag
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