Thermochromatium tepidum: E6P07_12690
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Entry
E6P07_12690 CDS
T06573
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ttp
Thermochromatium tepidum
Pathway
ttp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ttp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E6P07_12690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttp03400
]
E6P07_12690
Enzymes [BR:
ttp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E6P07_12690
DNA repair and recombination proteins [BR:
ttp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E6P07_12690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
WHD_PriA
HTH_IclR
HTH_20
AAA_30
DUF2786
AAA_19
HVO_A0261_N
PIF1
TrwB_AAD_bind
Zn_ribbon_6
HypA
Motif
Other DBs
NCBI-ProteinID:
QGU34054
UniProt:
A0A6I6E2C1
LinkDB
All DBs
Position
2746977..2749196
Genome browser
AA seq
739 aa
AA seq
DB search
MDRAAIWRVAVEAPLADTLDYLPPLDPPPAGSRPGLRLLVPFGRGARVGILIEVVDQSAH
PADKLRRVERVLDPEPLFDVLDLRLLAWAAAYYQQPLGAALFAALPARLRTPEPLSVETA
PGLRATESGRAVDLETLSRAPKQRALLDALRSEPEGLTLGELTARLGDSQSAIRTLRSKG
WITDVQLARAPDPVTETPPLAGPELHAEQQAAVEAVQAAFGAFGAFLLDGVTGSGKTEVY
IRLIESVIAQGRQALVVVPEIGLTPQLRERFRTRLPGPIAVLHSALKASERERNWLRAAR
GEANLILGTRSAVLAPIPRLGLIVVDEEHDDSFKQQDGLRYSGRDLAVRRAQLAGCPVVL
GSATPSLETLRNAKLGRYGWLRLTKRAGGARAPTISILDIRNQPLRAGLSPVLRAHMHAE
LAAGNQILLFLNRRGYAPVLTCHACGWVGECPHCDARLTLHLSERRLWCHHCGWSCPQPD
LCPACRRPELQMLGRGTERLEEELVALFPETRIARLDRDSTRRRGELGRVLDAVHRGEIQ
ILLGTQMLAKGHDFPGVTLVGVLELDQALYASDFRAAERIAQLIVQVAGRAGRAERPGRV
VLQTRHPEHPLLQSLLREGYSGFAEAALRERAEAELPPYSHLALARAESPNPEDALAFLR
QAHELGERLAADSGAIQLLGPIPAPMERRAGRHRAQLLIQCAERPRLQGFLTRWVNEVRT
LPRRKGLRWSLDVDPRDLL
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
ctggatcgggcagccatatggcgggtcgcggtagaggcgccactggccgacaccctcgac
tatctgccaccgctcgatccgccgcctgctgggtcgcgtccgggactgcgtctgctggta
ccctttggacgcggcgctcgggtgggaatcttgatcgaggtcgtcgaccaaagcgcgcat
ccagccgacaagctcaggcgggtcgagcgggtgctggatcccgagccgctgttcgacgtc
ctggacctgagactgctggcctgggcggcggcctactatcagcaaccgctcggcgcggcg
ctgttcgccgcgctcccggcgcgtctgcgcactcccgagccactgtcggtggaaaccgcg
cctggactccgggcgaccgagtctggccgggcggtcgatctggagacactcagccgcgcg
cccaaacaacgcgcgctcctcgatgccctgcgttccgaacctgaaggactgacgctcggc
gagctaacggcgcgactcggcgacagccagagcgccattcgcacgctcaggtccaaggga
tggatcaccgacgttcagctcgcgcgtgcgcccgatcccgtcaccgaaacgccgccgctc
gccggccctgaactccatgccgaacagcaggccgccgtcgaggccgttcaagccgctttc
ggcgcctttggcgcctttctgctcgacggcgtgaccggcagcggcaagaccgaggtctat
atccggctgatcgagtctgtcatcgcccaggggcgacaggcactcgtcgtcgtgcctgaa
atcggcctaacgccccagttgcgtgagcgcttccgcacccgactgcccggccccattgcc
gtgctgcattcggcactcaaggccagcgagcgcgagcgcaactggctgcgcgcggcgcgc
ggtgaggccaatctgatcctcggcacccgctcggcggtgctggcgccgatcccgcgtctg
ggactgatcgtggtcgacgaggagcacgatgactcattcaagcaacaggatggactgcgc
tactcgggacgcgatctggcggtacgccgtgcccagctcgctggctgtccggtggtgctg
ggttcggccacgccctcgctggagacactgcgcaatgccaagctcggacgctacggttgg
ctgcgtctgactaagcgcgccggcggtgcgcgtgcgccgacgatctcgatcctcgatatc
cgtaatcagccactgcgcgccggactctcgccagtgttgcgcgcgcacatgcacgccgag
ctcgcggcgggcaaccagatcctgctctttctcaaccgacggggctatgcgcccgtactc
acctgtcatgcctgcggctgggtcggcgagtgtccgcactgcgacgcgcgtctgaccctg
catctgagcgagcgccggctgtggtgtcaccattgcggctggtcctgtccccaacctgat
ctctgtcccgcgtgccggcgtccggagttgcagatgctcggacgcggcaccgaacggctg
gaggaggaactggtcgcgctcttccccgagacgcgcatcgcccggctcgatcgcgacagc
acgcgccgccggggcgaactcgggcgggtgctggacgcggtccacagaggcgagatccag
atcctgctcggtacccagatgctggccaagggccatgactttccgggtgtgaccctggtc
ggcgtcctggagctcgaccaggcgctctatgccagtgatttccgcgccgccgagcgcatc
gcccagctcatcgtccaggtcgccggacgggccgggcgcgccgagcgtccagggcgggtc
gtgcttcagacccgtcatcccgagcatccgttgttgcaatcactgttgcgcgagggctat
tcgggcttcgcggaggccgcgttgcgcgagcgcgccgaggccgagctaccgccctacagt
catctggcgctggcacgcgccgagtcacccaaccccgaggatgccctggcctttttgcgc
caggcgcacgaactgggcgaacggctcgccgctgactcgggcgcgatccagctgctgggg
ccgatcccggcaccgatggagcgacgcgctggacgccatcgcgcccagctcctgatccag
tgtgccgagcgtccgcgcctgcaaggcttcctcacccgctgggtgaacgaggtccgcacc
ctgccaagacgcaagggactgcgctggtcgctcgatgtcgatccacgcgatctgctgtaa
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integrated database retrieval system
