Tolypothrix tenuis: NIES37_10080
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Entry
NIES37_10080 CDS
T10359
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ttq Tolypothrix tenuis
Brite
KEGG Orthology (KO) [BR:
ttq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttq03400
]
NIES37_10080
DNA repair and recombination proteins [BR:
ttq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NIES37_10080
Archaeal homologous recombinant proteins
NIES37_10080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
SbcC_Walker_B
AAA_29
AAA_21
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
BAY97071
UniProt:
A0A1Z4MUH7
LinkDB
All DBs
Position
1244048..1247074
Genome browser
AA seq
1008 aa
AA seq
DB search
MIPIQLILKNFLSYRDATLDFRGLHTACICGSNGAGKSSLLEAITWAIWGESRAAAEDDV
IHTGSKEVRVDFTFQSNQQKYRVIRTRVRSGTSVLEFQIETPNGFRPLTGKGVRATQDLI
LEHIKLDYDTFINSAYLRQGRADEFMLKRPTERKEILAELLKLNQYDDLEERAKESSRQF
KARVEELERSLESIKIQLQQRETTQAQKVELEAELNQLQQVQAFETIQLQSLQVVQHQRQ
TKVEQLNFVRQQYQNLTQDCDRLQQEQLAVKNQIAELEKILSQEAEIKAGYQQYQTLQSQ
EEAFANKFAEFTRAQQNRQQKQQQLTKQINEIERQLQQAQAQLEALQQQEREIQQTLTKS
GEVEAGLAQLTAARQRVAHFDQLQMQVSPLLQQRATLQSQIDRFHAGLVARLEQLVTTEN
QLQRQQHRQPQLQQAVMDVAIQIEELEKKRVYLQRVQEKGQERRHFIERLQAHQRDYEKL
LGELEQKLQMLQTPNALCPLCERPLDEHHWDRVVSKTEEELKDTQGQFWVVREQMAVSDR
EIQVLRQEYRDIYQQLASYDTLREQRGQLAAQLEATSDVQQQLQQIAAEKQHLERSLQLG
DYAPDKQAELQQLDQYLQKLNYNEQDHALARSEVERWRWAEIKQGQIKDAIKRQTQLAAR
KPELEATIAQLQTRIQQEQVNSECAQQIAALDRYITELGYSPEQHNQLRLAVKQNQAWHL
RYQQMLSAQQQYPQLLTRSQELAAAKTARLAERQTLASQIDSISEQLEETANPTAQIQTL
EQQLQIRRRQLDEQIAKLGRLEQLAVQLESLQIQYEQQQQQLQATKQQQRVYQELAQAFG
KNGIQALMIENVLPQLEAETNQLLSRLSANQLHVQFITQKAGRNGKSTKKNVKLIDTLDI
LIADARGTRSYETYSGGEAFRINFAIRLALAKLLAQRAGAALQLLIVDEGFGTQDAEGCD
RLIAAINAIASDFACILTVTHMPHLKEAFQARIEVDKNQEGSHVRILT
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgatcccaatacaactaattctcaaaaattttctcagttaccgtgatgcaactttagat
tttcgcggtttacatacagcttgtatttgtggttccaatggtgcgggtaaatcttccctt
ctggaagcaatcacttgggcgatttggggtgaaagccgcgccgctgctgaagatgatgtt
attcatacaggctctaaagaagttcgggttgatttcactttccaaagtaaccaacaaaaa
tatcgagtgattcgcacccgcgtgcggagtggaactagtgttttagaattccaaatcgaa
acgcctaatggttttcgtcctctgactggcaaaggagtgagggcaacccaagatttgatt
ctagaacatatcaagctggattatgatacttttattaattctgcttacttacgtcaaggg
cgggcggatgaattcatgttgaagcgcccgacggaacgtaaagaaattttagcggagtta
ttaaagctgaatcagtatgatgatttggaagaacgcgctaaggaatcatcccgtcagttt
aaagcgcgggtggaggaattggaacgttctttagagtcgattaaaattcagttacaacaa
cgtgaaacaacgcaagcgcaaaaagttgagttagaagcagaacttaatcaactgcaacaa
gtgcaagcttttgaaactattcaattacaaagtttgcaggttgtacagcaccaacgccaa
acaaaagtagaacaactaaattttgtaagacaacaataccaaaatctgactcaagattgc
gatcgcctgcaacaagagcagttagctgttaaaaaccaaattgcggaattagaaaagata
ttaagccaagaagcggaaataaaagctggatatcaacaatatcaaaccttacaatcgcaa
gaagaggcttttgctaataaatttgcagaatttacccgcgcacaacaaaaccgccagcaa
aagcaacagcagctgacgaaacaaattaatgaaattgaacgccaactccaacaagctcaa
gctcaattagaagctttacagcaacaagaaagggaaattcagcaaaccctgactaaatct
ggtgaggtagaagctggtttggcgcaactcactgctgcgcgtcaaagagtagcgcatttc
gatcagttgcaaatgcaagtgtctcctttgttacaacaacgcgccactttacaaagccaa
atagatagattccatgcgggtttggtagcgcgcttagaacagctagtaaccacagaaaat
caactccaacgccagcaacatcgccaaccccaactgcaacaagcggtgatggatgtagcg
attcaaattgaggaattggagaaaaagcgggtttatttgcaacgcgtacaggagaaagga
caagaaagacgacattttattgaacgtttacaagcgcatcaaagagattatgaaaaactc
ttaggagaactagagcaaaaactgcaaatgctccagactccgaatgcactttgtcccctg
tgcgaacgtccccttgatgagcatcactgggatcgagtggtatcgaaaaccgaagaagaa
ttaaaagatacacaagggcaattttgggtagtccgcgaacagatggctgtatccgataga
gagattcaagtccttaggcaagaatacagagatatttatcaacaattagctagttatgat
accttgcgggaacaaaggggacagttagccgcccagttggaagctaccagcgatgttcaa
caacagttacaacaaattgcggcagaaaaacaacatttagagcgatcgctccaattaggt
gattatgccccggacaagcaagccgaactacagcagctagaccaatatctgcaaaaactc
aattacaatgagcaagaccatgcgttagcacgtagcgaagtcgagcgttggcgctgggca
gaaattaaacaagggcagattaaagatgcaattaagcggcaaactcaactagccgcacgt
aaaccagaattagaagcgactatcgcccaattacaaaccagaattcagcaagagcaagta
aattctgagtgcgcccaacaaatagccgccctcgatcgctatattacagaactaggttat
agccctgagcagcacaatcaattgcgtctggctgtcaagcaaaatcaagcttggcatttg
cgctatcaacaaatgctgtcagcccagcaacagtatccccaactgctgacgcgatcgcaa
gaattggcagcagccaaaactgcgagattagcagaacggcaaaccctagctagccaaatt
gacagcattagcgagcaattagaggaaactgctaacccaacagcccaaattcaaacctta
gaacagcaacttcaaattcgcagacgacaactcgacgaacaaattgccaaattagggcgt
ttggaacagttggcggtacagctagaatcactgcaaatccagtacgaacagcagcaacaa
caattacaagccactaaacagcaacaacgtgtatatcaggaattagcgcaagcttttggt
aaaaatggtatccaagcactaatgattgaaaacgtgctgccacagttggaagctgagaca
aatcagttactttcacgactcagcgccaatcaactgcacgtacaatttattacccaaaaa
gccggacgcaatggtaaatccaccaagaagaatgtcaagctaatcgacaccttagatatt
ttaattgccgatgccaggggcacaagatcctatgaaacctactctggtggtgaagctttt
agaattaactttgccattcgcctcgccctagccaaactcctagcacaaagggcgggagca
gctttgcaattgttgatagtcgatgaaggatttggtacacaggatgccgaaggatgcgat
cgcctaattgcagccatcaatgcgatcgcctccgatttcgcctgtatcctcaccgtcacc
catatgccccacttgaaagaggctttccaagcgcggattgaagttgataaaaatcaggaa
ggctcgcacgtgcggattttgacttga
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