Tolypothrix tenuis: NIES37_20550
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Entry
NIES37_20550 CDS
T10359
Symbol
apcE
Name
(GenBank) phycobilisome core-membrane linker protein ApcE
KO
K02096
phycobilisome core-membrane linker protein
Organism
ttq Tolypothrix tenuis
Pathway
ttq00196
Photosynthesis - antenna proteins
ttq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ttq00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
NIES37_20550 (apcE)
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
ttq00194
]
NIES37_20550 (apcE)
Photosynthesis proteins [BR:
ttq00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Allophycocyanin (AP)
NIES37_20550 (apcE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBS_linker_poly
Phycobilisome
CTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
BAY98107
UniProt:
A0A1Z4MX88
LinkDB
All DBs
Position
2500658..2503897
Genome browser
AA seq
1079 aa
AA seq
DB search
MSVKASGGSSVARPQLYQTLAVATITQAEQQDRFLGTGELNELATYFASGAKRLEIAQTL
TENSEIIVSRAANRIFVGGSPMSFLEKPREAELAMATVAPGNVQEGMKLGTVTYVESRGG
FLENLRSIFNSSPSGPTPPGFRPINVARYGPSNMAKSLRDLSWFLRYATYAIVAGDPNII
AVNTRGLREIIENACSGEATIVALQEIKAASLSFFRQDAKATEIVSQYMDVLLTEFKAAT
PSNKLRQRPSGDQQGLQLPQIYFEAAERRPKFVMKPGLSASEKNEVIKAAYRQIFERDIT
RAYSLSVSDLESKVKNGDISMKEFVRRLAKSPLYQKQFYQPFINSRVIELAFRHILGRGP
SSREEVQKYFSIISNGGLPALVDALVDSPEYSDYFGEETVPYLRGLGQEAQECRNWGPQQ
DLFNYSAPFRKVPQFITTFAAYDRPLPDQHPYGSGNDPLEIQFGAIFPKETRNPNTSPAP
FSKDTRRILINQGPGINSQVSNPGARGEFPGSLGPKVFRLDQLPGTIGKKAAKGASIKFS
ESSTQAVIKAAYLQVFGRDVYEGQRLKVQEIKLENGQLSVREFIRALAKSDVFRKTYWTS
LYVCKAIEYIHRRLLGRPTYGRQEINKYFDIAAKQGFYAVVDAIINSVEYSEAFGEDTVP
YERYLTPSGVALRQLRVGSIREDVGGKVQKQETPLFVTLGTVTDTRTEPDIQFRINQGVS
KQREQTKVFKQVANISDKAAVQTLISAAYRQIFERDVAPYIAKNEFSALESKLSNGEITV
KEFIEGLGYSNLYIKEFYTPYPNTKVIELGTKHFLGRAPLNQVEIRKYNQILATQGIRAF
IGALVNSAEYGEVFGEDTVPYRRFPTLPAANFPNTEKLYNQLTKQNDDLVVPSFKTVQPR
LTLAGTSSSGRNGFTDLGRSSTSAQGQLGETANRCKPARIYRLSGTNQAETQLVINAIYS
QVLDLFSSDIPANYRLNALEAKLQAGEISVREFVRELASSDVYCDRFYTPYPSAKVIEFL
CRHLLGRAPATQEEISEYNKLMASCGLRAVVEAIVDSSEYARYFGEDVVPYPRSSSLGN
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttaaggcaagtggtggaagctcagttgcgcgtccgcaactatatcaaacccta
gcagtagcaacaattacccaagcggaacaacaagaccgctttttgggaactggcgaactg
aacgaactggcaacctattttgcatctggtgcaaagcgtctagaaattgcccagacgctc
acggaaaattccgagattattgtatctcgggctgccaaccgaattttcgttggtggttcg
ccaatgtctttcttggaaaagccaagagaagcagaattggcaatggctactgttgctcct
gggaatgtgcaagaaggcatgaaactaggaaccgtcacctacgttgaaagtcggggtgga
ttcctggaaaatttacgctctatctttaacagttctcccagtggcccaacacctccaggt
tttagaccgatcaacgttgctcgttatggccctagcaacatggccaagagtctgcgggac
ttgtcctggttcttgcgctatgctacctatgcgatcgtggcaggtgaccccaatatcatc
gctgtgaatacacgcggtttgcgggaaattattgaaaatgcttgttctggtgaagcaaca
attgtggctttacaagaaatcaaagcagcatcattatctttcttccgtcaggatgctaag
gctacagagattgtgtctcaatacatggatgtattgctgacagaatttaaagcagcaaca
ccttccaataaactgcgtcaacgtccttctggagaccaacaaggtttacaactgcctcaa
atttactttgaagcagcagaacggcggcccaagtttgtgatgaagcctgggttatccgca
tcagaaaaaaatgaagtcatcaaagctgcatatcggcaaatctttgagcgcgatattact
cgtgcttacagcttgtctgtatctgacctagaatctaaggtgaagaacggcgacatctct
atgaaagagtttgtccgtcgtctagccaaatctcctctttaccaaaaacagttttaccag
ccttttattaatagccgagtaattgaactagctttccgtcatattttgggacgggggcca
agtagccgggaagaagtacaaaaatacttctcgattatttctaacggtggtctgccagct
ttagtagatgctttggtggattcgccagaatacagtgactactttggtgaagagacagta
ccttacctgcgtggtttgggtcaagaggcacaagaatgtcgtaactgggggccgcagcaa
gacctgtttaactacagtgcgcctttccgcaaagtacctcagtttattaccacattcgct
gcttatgatcgcccactccccgatcagcatccctatggttctggtaacgacccactagaa
attcagtttggggcgattttcccgaaagaaacccgcaatcccaacaccagccctgcacct
tttagcaaggatactcggcggatcttaattaaccaagggcctggtattaatagccaagtt
agcaatcctggtgccagaggtgagttccctggtagcttagggcctaaagtcttccgcttg
gatcaactgccaggcacaattggcaaaaaagctgctaaaggcgcaagcattaagttctcc
gaaagctctactcaagcagtcatcaaagctgcatacttgcaagttttcggtcgtgatgtt
tacgaaggtcagcgcttaaaagtccaagaaatcaagctagaaaacggacaactctctgtc
agagaatttattcgtgctttagccaagtcggatgtattccgcaaaacctactggacttcg
ctgtatgtttgtaaagcgattgaatacatccaccgccgcttgttaggtcgtcctacctac
ggtcgtcaagaaatcaacaaatattttgacatcgccgctaaacaaggcttttatgccgta
gtagacgcaattatcaacagcgtagaatacagtgaagcatttggtgaggatacagttcct
tacgaacgctatctgactccatctggtgtggcgttgcgacaactgcgagttggcagtatc
cgcgaagatgtcggtggaaaagtccagaagcaagaaacaccattgtttgtaactttaggt
acagttaccgacactcggacagaaccggatattcaattccggattaaccaaggtgttagc
aagcaacgcgaacaaaccaaagtcttcaagcaggtggcaaacatcagcgacaaagctgct
gtgcaaactttgatcagcgccgcctaccgccagatttttgaacgcgatgttgcaccttat
atcgcgaaaaacgagttctctgctttagaaagcaaactgagtaacggggaaatcactgtt
aaggaattcattgaaggtttgggttactctaacctctacatcaaagagttctacactcct
taccccaacactaaggtaattgaactgggaactaagcatttcttgggacgcgcaccctta
aatcaagtagaaatccgcaagtataaccagattttggctactcaagggattcgcgccttt
atcggtgctttagttaacagtgcggagtatggcgaggtatttggtgaagatacagtacct
tatcgtcgcttccccaccctacctgcggctaacttcccgaacactgaaaagctgtacaac
cagctgactaagcaaaatgatgatttggtagtaccaagctttaagacagtacaaccacgc
ctgactttggcaggaacatcatcttcgggacgtaatggttttactgacctgggtcgttct
tctactagcgctcagggacaattgggcgaaacagcaaatcgttgcaaacctgcacgcatt
tatcgtctgagtggtacaaaccaagcggaaacccaattggtgatcaatgccatttactct
caggtattagatttatttagcagtgatatacctgctaattaccgcttaaacgcactagaa
gccaaactgcaagctggagaaatctcggtacgtgagtttgtccgtgaactagctagttcc
gatgtctattgcgatcgcttctacacaccctaccccagcgctaaagtaattgagttcctc
tgccgtcacctgttgggacgcgcaccggctactcaagaggaaattagcgaatacaacaag
ctgatggctagctgtggtctaagagctgttgtagaggcaattgttgatagttcagagtat
gcccgctactttggtgaagatgtggtaccttacccacgttcctcttccttaggtaactaa
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