Tolypothrix tenuis: NIES37_70980
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Entry
NIES37_70980 CDS
T10359
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ttq Tolypothrix tenuis
Pathway
ttq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NIES37_70980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttq03019
]
NIES37_70980
03400 DNA repair and recombination proteins [BR:
ttq03400
]
NIES37_70980
Enzymes [BR:
ttq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NIES37_70980
Messenger RNA biogenesis [BR:
ttq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NIES37_70980
DNA repair and recombination proteins [BR:
ttq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NIES37_70980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
ERCC3_RAD25_C
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BAZ03085
UniProt:
A0A1Z4NBM2
LinkDB
All DBs
Position
plasmid2:complement(28886..30874)
Genome browser
AA seq
662 aa
AA seq
DB search
MNTKAKEVFEKEFPALAGVFSLKPFQEKVINHLIENGSTLAVMPTGGGKSLIYWVTAKAL
KGTCLVISPLIALIDEQAEKLEKEGFEVLAIHSGMGASEQMKQLKKFAQGESKPDFIFAS
PERMATDGFFEYCISLQINKIKLVVIDEVHCISQWGFDFRPFYKHIPTFLNSVFSDKWPT
ILGLTATINPKELIDITTDFKIKKSSIIKDDVLLRFDIDLKVEKLSNEEEKKARLWQIID
NHTNEKVLVYLYRKYHKGGVEDLCETANQKGLKALSFHGDMSSSERQSVLNEFRDGSTNL
VFATNAFGMGIDIPNIRVVIHFMIPESIEQYYQEIGRSGRDKNGAISYMLYSNKNVQVRK
THFIDKSFPPGDQIKELFKKATNNEVGKKTLQYFAEEELQSALPYFLNCGAITIEGKGFT
GLKVFKTNSNPMLKSIIESSRTGMVVPVLLKPEFSKLTCREFFNITYKALVDNEAKLAKN
LDKCLIIEATEEYLTDEQIETISNETASKREYKHNLLDYLVYLLDNFDSSISMHQDIGRY
LGVSKHSLNKIHQTENGIWVRSKSEVIIANILYRSNIDFQYEEKLFYNETQWKEPDFTIR
HNNNVWYWEHLGLLGNEQYNENWQEKKQIYKKLGVLDKVLTTKESTVLSNQVNELIKKIK
MS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaatactaaagcaaaagaagtttttgaaaaagagtttcctgctttagcaggtgtgttt
tctttaaaaccatttcaagagaaagtaattaaccatcttatagagaatggttcaacatta
gcagtaatgccgacaggtggtggaaaatccctcatttattgggttactgcaaaagcacta
aaaggaacttgtttagttatttcaccattgatagcacttattgacgaacaggcagaaaaa
cttgaaaaagaaggttttgaagtcttagctattcacagtggtatgggagcttcagaacaa
atgaagcaattaaaaaaatttgctcaaggtgaatctaaacctgatttcatttttgctagt
ccagaaaggatggcgacagacggattttttgaatactgtatttcattgcagataaataaa
atcaaattagtcgttattgatgaagtccattgtataagccaatggggatttgatttccga
ccattttacaagcatataccaacttttcttaattcagtcttttcagataaatggccaaca
attttaggtttgacagccacaataaatccaaaagagcttatcgatattactactgatttt
aaaattaaaaaaagttctatcatcaaagatgatgtattgttaagatttgatattgatttg
aaagttgagaagctatcaaacgaagaagaaaagaaagctcgtctttggcaaataatagat
aaccacaccaacgagaaagtattggtttatttatatcgtaaataccacaaaggtggtgtg
gaagatttgtgtgaaactgcaaatcaaaagggactaaaggcattatcatttcatggagat
atgagtagctccgaacggcaaagtgttctaaacgaatttagagatggttcaaccaattta
gtttttgcaacaaatgcctttggaatgggtattgatattcccaatattcgagttgtaatt
cattttatgatacccgaatctattgagcaatattatcaagaaattggacgttcaggaaga
gacaaaaatggtgctatttcctatatgctttattctaataaaaatgttcaggtaagaaaa
acacactttatcgacaaatcatttcctccaggggatcaaatcaaagaattgttcaaaaag
gcaactaacaatgaagttggtaaaaagactttgcaatattttgcagaagaagaattacaa
tcggctctaccttattttttgaattgcggtgcaattacgatagaaggcaaaggctttaca
ggcttaaaagttttcaaaactaactcaaaccctatgttgaagtcaataattgaatcttca
agaacgggaatggttgttcctgtattgttaaaacccgaattttcaaaacttacttgtcga
gaatttttcaacataacctataaagcattagttgataatgaggcaaaattagctaaaaat
cttgacaaatgcttaattattgaagcaacagaagaatatcttactgatgagcaaattgaa
acaattagtaatgagactgcaagtaaaagagagtataaacataatctattagattatctc
gtttatctccttgataactttgacagttcaatttcaatgcaccaagatattggaagatat
ttaggcgtaagtaagcattcactaaataagatacatcaaactgaaaatgggatttgggtt
cgttcaaaatcagaagtgataattgcaaatattctttatcgttcaaatattgattttcaa
tatgaagaaaaacttttttataatgaaactcaatggaaagaacctgactttacaataaga
cataataacaatgtttggtattgggaacaccttgggcttttgggtaacgagcaatataac
gaaaattggcaggagaaaaagcaaatttacaaaaaactcggagtacttgacaaagtatta
acgacaaaagaaagtacagttttgagcaatcaagtgaatgagttaattaaaaaaattaaa
atgtcataa
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