Thermobaculum terrenum: Tter_0485
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Entry
Tter_0485 CDS
T01134
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ttr
Thermobaculum terrenum
Brite
KEGG Orthology (KO) [BR:
ttr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttr03032
]
Tter_0485
03400 DNA repair and recombination proteins [BR:
ttr03400
]
Tter_0485
Enzymes [BR:
ttr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Tter_0485
DNA replication proteins [BR:
ttr03032
]
Prokaryotic type
DNA Topoisomerases
Tter_0485
DNA repair and recombination proteins [BR:
ttr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Tter_0485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
CK_II_beta
Motif
Other DBs
NCBI-ProteinID:
ACZ41406
UniProt:
D1CEQ0
LinkDB
All DBs
Position
1:complement(540884..543019)
Genome browser
AA seq
711 aa
AA seq
DB search
MANKLVIVESPTKAKTISRYLGRGYSIKASMGHVRDLPKSKLGVDTEHDFQPQYLIPRDK
SKTVKELKESVASAREVYLATDPDREGEAIAWHLIQATGMDTSKARRVVFHEITPDAVRN
AMANPREIDMRLVDAQQARRVLDRLVGYNISPLLWKKVKRGLSAGRVQSVALRLVVDRER
EIQSFVPVEYWTISADLAKQPAKGRKPSRKDQFRALLVRINDEKVEISNEEQARAIIEAL
EGATYKVLEVKQREIQRKPAPPFITSTMQQEASRKLNFNARRTMSVAQSLYEGVSLGDEG
DVGLITYMRTDSTNVATVAQEEARQVIAQLFGDKYLPEKPPVYTKKAKNAQEAHEAIRPT
SVKRHPDAIKQYLTSDQYKLYKLIWQRFIASQMANAIIDGTTVDIAAEPRSGGAPYIFRA
TGSVIKFDGFLVVYQEGKDDDQEEELGSKALPPMTEGEVLNLIQLLPEQHFTQPPPRYTE
ASLVKALEEQGIGRPSTYAIILSTLQERYYVVKDGKALVPTELGMLVNDLLVEHFPDIVD
VNFTSQMEEELDDIASGERAWVPVIKEFYGPFERKVRIAEEEMQKVDIQDEPAGENCPNC
GRPMVFKMGRYGKFIACSGFPECRTTKAIVNRTGVQCPACRQGELVERRSRKGRRSIFYA
CDRYPDCEFTISAKPLPQPCPACGGLQVEDGKNGQKCIRCDGQGNILQKSA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaactagtaatagttgagtcgcctaccaaggccaagacgatcagcagatat
ttgggcagaggctactcgatcaaagcctctatggggcacgtccgagacctccccaagagc
aagctgggagtagataccgagcacgacttccagccacagtacctcatacccagagataaa
tcaaagacagttaaagagctcaaggagagcgtggcctcggcacgagaggtgtatctagca
actgaccccgatcgtgagggggaagctatcgcctggcatctgatacaggccactggtatg
gacactagcaaagcccgaagagtcgtatttcacgagataacaccagatgcagtacgcaac
gccatggctaatcctcgcgagatcgacatgaggctcgtagatgctcagcaagctcgaaga
gtccttgaccgacttgtcggctacaatatcagccctcttctatggaagaaggtcaagaga
ggactatcggcaggaagagtacaatcagtggccctgagactggtagttgatcgtgagcga
gagatccagtcctttgtgccagtagaatactggaccatctctgccgaccttgccaagcaa
ccagcgaagggcaggaagccgagtcggaaggatcagttcagggccttactggtaaggatc
aacgacgagaaagtagagatctccaacgaggagcaggccagggcgataatcgaggctctg
gaaggtgccacgtacaaggtacttgaagtcaagcagcgggagatccaaagaaagcccgcg
cctccctttatcaccagcaccatgcaacaggaggcatccaggaaacttaatttcaacgcc
cgccgaaccatgagcgtggcccagagtctatacgaaggagtatcactgggcgatgagggt
gatgtcggtctaataacttatatgaggaccgacagtaccaacgtggctactgtggctcag
gaagaagccaggcaggtcattgcccagttgtttggggacaagtatctccctgaaaagccg
ccggtatacaccaaaaaggccaagaacgctcaagaagcacacgaggccataaggcccacc
agcgtcaagaggcatcctgatgccataaagcagtaccttacatctgaccagtacaagctc
tacaagcttatatggcagaggtttatagccagccagatggccaacgcaataatagacggc
accaccgtcgatatagcagcagaacccaggagcggtggagccccctatatcttcagagct
acaggctcggtaataaagttcgatggctttttggtagtgtaccaggaaggcaaggacgac
gatcaggaagaggagctgggcagtaaggctctgcctcctatgacagagggagaggtgctg
aacctgatacaactgttgcctgagcagcacttcacacaacctcccccgagatataccgag
gcatcgctggtgaaggctctggaggaacagggtatagggagacctagcacctatgccata
atcctctccacgctgcaggaaagatactacgtggtcaaagacggcaaagcattagtacca
acggagctgggtatgctcgtcaacgacctgctggtcgagcacttcccggacatagtcgac
gtaaactttacatctcagatggaagaggagctagatgatatagcctccggagagcgcgca
tgggtgccggtgattaaggaattttatgggccgttcgagcgcaaggtgcgcatagcggaa
gaagagatgcagaaggttgacattcaggacgaaccggcaggcgaaaactgtcccaactgc
ggcagacccatggtcttcaagatgggcagatatggcaagtttatagcctgctctggtttc
cctgagtgccgtacgaccaaggccatagtcaaccgcacaggggtgcagtgcccagcctgt
cggcagggagaactggttgagaggcgttcccgcaaaggcaggagatctatcttctatgca
tgcgacaggtatccagattgtgagttcacgataagcgccaaaccccttccacagccctgc
ccggcctgcggtggcctccaggtcgaagatggcaagaacgggcaaaagtgcatcaggtgc
gacgggcagggaaatatactgcagaaaagcgcttag
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