Thermobaculum terrenum: Tter_0709
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Entry
Tter_0709 CDS
T01134
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ttr
Thermobaculum terrenum
Pathway
ttr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ttr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tter_0709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttr03021
]
Tter_0709
03400 DNA repair and recombination proteins [BR:
ttr03400
]
Tter_0709
Enzymes [BR:
ttr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tter_0709
Transcription machinery [BR:
ttr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tter_0709
DNA repair and recombination proteins [BR:
ttr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tter_0709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Muted
Motif
Other DBs
NCBI-ProteinID:
ACZ41626
UniProt:
D1CFC0
LinkDB
All DBs
Position
1:772223..776449
Genome browser
AA seq
1408 aa
AA seq
DB search
MVQVNEFGAIRISLASPEQIRAWSYGEVTKPETINYRTQKPERDGLFDERIFGPTKDWEC
YCGKYKRIRYRGVICEKCGVEVTRSRVRRERMGHIELASPVSHIWFFKGTPSRMGLLLDM
SPRNLERVLYFASYIVTWVDNEALEKIKASLEEELASRSAEIESVLSSNIENLDQSTRDE
VARIEEAGRISMDQILAEKKAKVAAIDEEANALEEQLSSMIGEAASEQIWFGKGQPWQHV
LVEEGEAINESRIEELHDIVESVIARIEREYDDKLERARALMEAEREQLLFAGSSDRQKV
AEQAHKEKEALRRQLEEKKRLLDMLRPMTLLTDTEYRQLQAEFGDIFRAGMGAEAILEIL
KNIDLDKLAEELRLEMQSSSGQRRKKATKRLRVVEAFRRSGNKPEWMIFTALPVLPPDLR
PMVQLDGGRFATSDLNDLYRRVINRNNRLKRLQELGAPEIIIRNEKRMLQEAVDALIDNG
RRGRPVAGSSKHKLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPDLQLHQCGLPK
RMALELFKPFVMRRLVQKGYAVNIKSAKRIVERMRPEVWDVLEEVTSEHLVLLNRAPTLH
RLGIQAFEPVLIEGSAIQLHPLVCAAFNADFDGDQMAVHLPLSQAAQQEAKERMLSKVNL
LSPSNGDPIVTPTHDIVLGVYYMTKARPGAKGEGKMFANPEEAQLAYELGYIDLQAPIKV
RLGNNGDAQTVETTVGRLIFLDALPAEMRRDPKLLSEVTDRKGLRNIVAEVYRRYGRERT
AQVVDVIKRIGFHYATKGGMTISVDDLQIPSIKKDLIAQANERVRMVDEDYARGLLTAEE
RERETIKIWTETREELTKAVQETLDDYGAIKMMAISGARGNMQQISQMAGMRGLMADPLG
RIIPLPIVSNFREGLSVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVAQDVIVTED
DCGTENGIVLKNEEDESGLIPTFSERLLGRVAAKPVVDPETGEVIVERNQEITEELRDKI
LELGIQEVVVRSPLECETSFGVCRMCYGRDLATGSLIELGEAVGIIAAQSIGEPGTQLTM
RTFHTGGVATESGDITSGLPRVEELFEARTPKGQALISEQDGTVEITENEDGTRKLKIVY
EYPFIDKYKFPEGAELLIESGQSVVQGMALARWKEGDSWADITARRAGQAVINDGRIEVS
GITREEKEYVVPAAARLRVENGQHVNAGDQLTEGNSNPHDILRINGREEAQRYLVDEVQR
VYRSQGVNTNDKHIEIIVRQMLRKVTIDDPGDTELLPGELIDKFTLMEVNSRVIAEGGIP
ATAYYELLGVTKASLRTSSFLSAASFQETTRVLTEAAINGSVDYLRGLKENVIIGKLIPA
GSGWKKRTAEETELATDDLALIGLMQTE
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atggtacaggttaatgaattcggtgctatcagaataagccttgcttcacctgagcaaatc
agggcttggagctatggcgaggtcactaagccagaaactataaactatagaacccagaag
cctgaaagagacggactatttgatgaacgtatcttcggaccaactaaggattgggaatgc
tactgcggtaagtataagcgtatacgctacagaggcgtcatatgtgagaagtgcggcgta
gaggtcactcgctccagggtgcgccgtgaaaggatgggccatattgagctggcgtcccca
gtcagccatatatggttcttcaagggcactcccagcaggatgggtctattgctagatatg
tctcctcgtaacctggagcgcgtgttgtacttcgcctcctacatagttacctgggtagat
aatgaagctttggagaagataaaggcttccctggaagaggagctagctagcaggtctgct
gagatcgagagtgtgctctcttcgaatatagaaaatctagaccagagcacaagagatgag
gttgcccgaatagaagaggcgggcaggatatccatggatcagatactggctgagaagaaa
gccaaagttgctgcgatagatgaggaggctaatgctcttgaagagcagctctcttccatg
attggtgaggctgcgtctgagcagatatggttcggcaaggggcagccatggcagcatgtg
ttggtggaagaaggggaagccatcaacgagtccaggatagaggagctgcacgacatcgta
gagagcgtgatagcacgcatagagagagagtatgacgataagcttgagcgcgcccgtgcc
ctaatggaggccgagagggagcagttgctctttgcgggctcctctgatcgccagaaggtt
gctgagcaggctcataaggagaaagaggctctgcgcaggcagctcgaggagaagaagagg
cttcttgatatgctgcgccccatgacgctgctaactgatacggagtacaggcagctgcag
gctgagttcggtgatattttccgtgccggcatgggggcagaagccatccttgagatacta
aagaatattgatcttgataagcttgcggaagagctcaggcttgagatgcagagttcctct
ggacaaagaaggaagaaggctacaaagagactaagagttgtagaggccttcaggagaagt
gggaataaacctgagtggatgatattcacggctcttcctgttctgcctcctgacctgcgt
ccaatggtgcagctagacggaggtcggttcgctactagcgacctgaacgatctatataga
agggtcatcaaccgcaataatagattgaagaggttgcaggagcttggcgcccctgagatc
ataatccgtaatgagaagcgtatgctgcaggaggcggttgatgcgctgattgataacggg
cgtaggggcagaccagtagccggctcgagcaagcataagctcaagagcctgtctgacatg
ctcaaaggcaagcagggaaggttccgccagaacctgcttggaaagagggttgactactct
ggtagatcagtaatcgtggtaggtcccgatcttcagcttcatcagtgcggactacccaag
aggatggcgctggaactgttcaagcccttcgtcatgcgcagattggttcagaagggctac
gcagtaaacataaagagcgccaagagaatagttgagcgcatgcgcccggaggtttgggac
gtcctcgaagaggttacgagcgagcatctagtgctcctgaaccgcgcaccaaccctgcat
aggctaggtatacaagcctttgagcccgtgctcatcgaaggttcagccatacagcttcat
cctttggtatgtgcagcattcaacgctgacttcgatggtgaccagatggcggtgcaccta
ccgctatctcaggcggctcagcaggaggctaaggagagaatgctctctaaggtaaacctg
ttgtcgccctcaaacggtgatccgatcgtcacacctacacacgatatagtgttgggtgtc
tactatatgaccaaagctcgtcctggagccaagggagagggcaagatgtttgccaacccc
gaggaggcacagcttgcttatgagctcggctacattgacctccaggctcccatcaaggtg
cgtctgggcaacaatggagacgctcagacggtagagactactgtaggtaggcttatattc
ctggatgctctacctgctgagatgcggcgtgatcctaagctcctatctgaggtcaccgat
aggaaggggctgcgtaacattgtggcagaggtttacaggaggtatggtagagagcgcaca
gctcaggtagtagacgtaatcaagaggataggtttccattatgccactaagggtggtatg
accatatctgtagatgacctccagatacctagtatcaagaaggatctgatagctcaggct
aatgaaagagtccgcatggtagatgaggactacgcacgcggtctactcactgctgaggag
cgcgagcgagagacgatcaagatatggacagaaaccagggaagaacttaccaaggccgta
caggagacgctggacgattatggcgccatcaagatgatggctatatctggtgctcgaggt
aacatgcaacagatcagccagatggcgggcatgagaggactgatggcggatcctcttggc
agaataatacctctgcccattgtctcgaacttccgagagggtctatcagttctggagtac
ttcatatctactcacggtgcacgtaaagggttggcagatacggctctacgaactgcagac
tctggttacctaacgaggcgtctggtagatgttgcccaggatgtgatagttaccgaagat
gactgcggtacggagaacggtatagtactcaagaatgaagaggatgagagcggtctaata
cctaccttctctgagagactgcttggtcgagtagccgccaagcccgtggtcgatccggag
actggtgaggttatagttgagcgtaatcaggagatcacagaggagcttagagacaagatt
ctagagcttggcattcaggaggtagtagtcagatcgccacttgagtgcgagacctcgttc
ggtgtctgtaggatgtgctatgggcgcgacttggccacaggatctctgatagaactaggc
gaagcagtgggtattattgctgctcagtcgatcggtgagcctggtacgcagctaacgatg
cgtacgttccatacaggtggtgtggctacagagtccggagacataacaagtggtctccca
agggttgaagagctatttgaggccaggacacctaagggtcaggctctcatatccgagcag
gacggtacggttgaaatcactgagaacgaggacggtactcgcaaactgaagatcgtctac
gagtatccgttcatcgataagtataagttcccagagggcgctgagttgctaatcgagagt
ggccaatcagttgtgcagggtatggcattggccaggtggaaggaaggcgattcctgggct
gatataacagctcgaagggctggtcaagctgtgatcaatgatggtcgtatagaagtctct
ggtataactcgagaggagaaagagtatgtagtaccagcagctgccaggctcagagttgag
aatggacagcacgtcaacgctggggatcagctgacggagggtaactctaatcctcacgat
atacttaggatcaatggtagggaagaggctcagcgatatctcgtagacgaggttcagagg
gtctacagaagccaaggcgtgaacacgaacgacaagcacatagagataatcgtgcgtcag
atgctacgcaaggtaactatagatgaccctggcgacactgagctgctccccggtgagctt
atagataagttcaccttgatggaggtaaactccagggttatagcggagggaggtatccca
gctactgcatactatgagttgcttggagttaccaaggcttctctgaggactagcagcttc
ctgtctgcagcttcattccaggagacaactagggtccttaccgaagctgcaataaacggg
agcgtagattacctcagagggctcaaggaaaacgtgatcataggtaagctcataccagct
ggctctggctggaagaagaggacagccgaggagactgagcttgcaactgatgacctggca
ctcataggactgatgcagactgagtaa
DBGET
integrated database retrieval system
