Thermobaculum terrenum: Tter_0928
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Entry
Tter_0928 CDS
T01134
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ttr
Thermobaculum terrenum
Pathway
ttr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ttr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tter_0928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttr03400
]
Tter_0928
Enzymes [BR:
ttr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tter_0928
DNA repair and recombination proteins [BR:
ttr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tter_0928
RecFOR pathway proteins
Tter_0928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_22
AAA_16
AAA_24
RNA_helicase
AAA_3
AAA_14
nSTAND3
TsaE
NB-ARC
AAA_17
AAA_18
DUF815
IstB_IS21
Rad17
Bac_DnaA
AAA_28
NTPase_1
AAA_25
NPHP3_N
bpMoxR
ABC_tran
NACHT
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
ACZ41845
UniProt:
D1CFY9
LinkDB
All DBs
Position
1:986551..987615
Genome browser
AA seq
354 aa
AA seq
DB search
MLQRAIDPTKYPEDDIQEATVRPKRLDEYIGQDQIKDRVKVIIEAAKARGEAIDHILLYG
PPGLGKTTLATIIANEMGVKIHSTSGPAIERPGDVASILSKLQPFEVLFIDEIHRLPRPV
EEMLYSAMEDFKVDFVYGKGPNAGTVTLPLPPFTLIGATTRLALLSSPLRGRFGDIFRLE
YQDIDSMAAIVKRAANILKVGITDEGALEIARRSRGTPRVAIRLLRRVRDYAQVRADHLI
DHETACKALDIQGVDELGLDEVDRRILLAIIEKFDGGPVGLETLAASISEEPDTIMDVYE
PYLLILGFIQRTPRGRVATRRAYDHLSIPYPESKSKTENNTEQPTLWENNEDDE
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaacgtgctattgatcctacaaaatatccagaagatgatatacaggaagccacg
gtcaggcccaagcgattagatgaatatattggtcaagatcaaataaaggaccgggtcaag
gttatcatcgaggcggctaaggcaaggggggaggccatagaccatatattgctctacggc
ccaccgggtttaggcaagactacacttgctacgattattgccaatgaaatgggtgtgaag
atacattctacatccgggcctgctatagaaagacccggtgatgtagcatctatcttgtct
aagttacagccatttgaggtcctattcattgatgaaatccataggctgcctcgacctgtt
gaggagatgctttactctgctatggaagactttaaggtagatttcgtttatggtaaggga
cctaacgcgggcacagtcaccttgcctttacctccttttacacttattggtgctaccact
aggctagctttgcttagctctccactgcgaggtaggttcggggatatcttcaggcttgaa
tatcaggatattgactcgatggcagccatagtgaagagggctgctaatatcctcaaagta
ggtattacagatgagggagccttagagatagcccgccgtagcagaggcactcctagagtc
gctatcagactattgagaagggtaagggattacgctcaggtaagggcggatcacttaatt
gaccatgagactgcatgcaaggcgcttgatattcagggagtagatgagcttggccttgat
gaggttgatagacgtatactcctcgcaataatagagaaatttgatggtgggcccgtggga
cttgagacgctagcagcgtccatctcagaggaaccagacactataatggatgtttacgaa
ccctacctgctaatacttgggttcatacaacgtacgcccagaggtagagttgctaccaga
agggcctatgaccacctgtccataccatatccggaaagtaagtccaagacagaaaataat
acggaacaacctactctttgggagaacaacgaagacgatgaatga
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