Thermobaculum terrenum: Tter_1073
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Entry
Tter_1073 CDS
T01134
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
ttr
Thermobaculum terrenum
Pathway
ttr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ttr00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Tter_1073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttr03021
]
Tter_1073
Transcription machinery [BR:
ttr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Tter_1073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
CTD8
Motif
Other DBs
NCBI-ProteinID:
ACZ41989
UniProt:
D1CB24
LinkDB
All DBs
Position
1:complement(1151922..1153313)
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AA seq
463 aa
AA seq
DB search
MIQDYKFRISIPSDGSFIEDAHLQSEESFELESEDIAIEFSDDATNDVDQEGSDLSDLEH
IEGYADDLDEPVQMYLREIGKVPLLTAEQEVILARKIELSRRLDEYWLQQHTNADVTLVA
LKIYKSASLGYVQAKEWLPTDVSLPLSELYQAAITHARESFAKDEEVKKLLEAEQDMYLL
PPLITEYIERSNKCPDVKTVSQVLLANKSIVINHWNKVRKEGEGAKCKLIEANTRLVVSI
AKKYLGRGLSLLDLIQEGNIGLMRAADKFDYTRGYKFSTYATWWIRQAVTRAIADQSRTI
RLPVHVCETVSKIHKTSQKLQQELGHEPTIEQLSSELGMPMKKVVQIQQASKFPVSLEAP
IGEDGDSMLGDFLEDVHVLNPVQKAANDILREQINSVLQNLPPKERKVLELRFGLVDGKC
RTLEEVGNEFAITRERVRQIECTALRRLRENHLIKQLRDFLED
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgattcaagattacaagttccgtattagcatacccagtgatgggtcgttcatagaagat
gctcatttacaatctgaagaaagcttcgaattagagagtgaagacatagcgattgaattc
tctgatgacgctactaacgatgtagaccaggaaggtagtgacctaagtgatctcgaacat
atagaaggctacgctgacgatctggacgagccagtccagatgtaccttcgagaaattggt
aaggtcccactactaacggcagagcaagaggttatccttgccaggaagatagaattatct
cgtaggttggatgaatactggcttcaacagcacacaaatgcggatgtaaccttagtagct
ctcaagatatataaatccgcatctttgggttacgtgcaagcaaaagagtggcttcccaca
gacgtaagcttacctctatctgagctctatcaagcagctataacacacgcacgtgagtca
tttgcaaaagacgaagaagtcaagaagttgctggaagcagagcaagacatgtacttgctc
ccccctctcatcacggaatacatagagcgctcaaataagtgtccagatgtcaaaacagta
tcacaggtcctattggccaacaaaagtatagtcatcaaccactggaataaggtaagaaaa
gaaggagaaggagcgaagtgtaagctgatagaggccaatacaaggctagtggtaagtata
gctaagaaatacctgggcagaggattgtcactactagatcttatacaagaaggcaacata
ggcttaatgagagccgctgacaagtttgactatactcgcggttacaagttctcgacctac
gcgacttggtggataagacaagcagtaactagagcaatagcagaccaatctagaaccata
cgtcttccagtccacgtatgcgaaaccgtcagtaagatccataagacaagtcagaagtta
caacaagagctcgggcatgaacctacaatagagcaactttccagtgagttaggtatgcct
atgaagaaagttgtgcagatacaacaggcttccaagttccctgtgtcgctggaagcccct
ataggtgaagacggtgatagcatgttaggagatttcctagaagacgtccacgtgctaaat
ccagtgcaaaaagcggcgaatgacatacttagggaacaaattaactcagtcctccagaac
cttccaccaaaagagagaaaggttctggaactgaggtttgggttagttgacggtaaatgt
aggacacttgaagaagtaggtaacgaatttgctataactagggaacgggtgagacaaata
gagtgtaccgccttgcgtaggctaagggaaaaccatttgataaagcagttacgagacttt
ctagaggattag
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