Thermobaculum terrenum: Tter_1655
Help
Entry
Tter_1655 CDS
T01134
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ttr
Thermobaculum terrenum
Brite
KEGG Orthology (KO) [BR:
ttr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ttr03016
]
Tter_1655
Enzymes [BR:
ttr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Tter_1655
Transfer RNA biogenesis [BR:
ttr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Tter_1655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Corona_NS2A
Acb1
Motif
Other DBs
NCBI-ProteinID:
ACZ42561
UniProt:
D1CCP6
LinkDB
All DBs
Position
1:complement(1788174..1788758)
Genome browser
AA seq
194 aa
AA seq
DB search
MSDDKARLFLAIDIPKSIRSILYDLGRSGLAGSTGLKWVEESNIHLTLKFLGDVSRSQID
AIQDVLEDITCPDSIGLEIRGLGIFGNLRRPRVLWAGVSGDIEALRLLHQEVEDKCARLG
FDRDVMEYRPHVTLARFKESFADTPSLRRLLGANNDVSLGSFIAESMVLYQSTLLPSGPV
YTPVKTFNLIENKD
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgataaagcaagattgtttttagctatagatatccccaaaagcattcggagc
atattatatgatctaggacgctccggattagctggttctaccggtcttaagtgggtagaa
gagtccaatatccacctaaccttgaaatttctgggggatgtctcaaggtcgcaaatagat
gctattcaagatgtcttggaagatataacttgtcctgacagcataggtttggagatcagg
ggattgggcatatttgggaacttacgaaggccaagagttctatgggcaggagtttctggg
gacattgaagctttgaggttacttcaccaagaggtggaagataaatgtgctcggttaggg
tttgaccgagatgttatggagtatagaccccatgtaaccttggccaggttcaaggaatcc
tttgctgatactccttctctacgcaggcttttaggagctaataatgatgtatcattagga
agctttattgcagagagcatggtgctctaccaaagcacccttttgcctagtggacctgtc
tatacacctgtaaaaaccttcaatctgatagaaaacaaggattga
DBGET
integrated database retrieval system
