Thermobaculum terrenum: Tter_1789
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Entry
Tter_1789 CDS
T01134
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ttr
Thermobaculum terrenum
Pathway
ttr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tter_1789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttr03019
]
Tter_1789
03016 Transfer RNA biogenesis [BR:
ttr03016
]
Tter_1789
Enzymes [BR:
ttr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Tter_1789
Messenger RNA biogenesis [BR:
ttr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Tter_1789
Transfer RNA biogenesis [BR:
ttr03016
]
Prokaryotic type
tRNA degradation factors
Tter_1789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KhpA-B_KH
KH_2
Motif
Other DBs
NCBI-ProteinID:
ACZ42695
UniProt:
D1CD30
LinkDB
All DBs
Position
1:complement(1928009..1930210)
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AA seq
733 aa
AA seq
DB search
MISKFETIWAGRKLSIETGRIAGQAHGAVLVQYGDTVVLTTAVRADAPSNMDFFPLTVQY
EERMYAAGKIPGGFIRREGRPSENATLAARLTDRPLRPLFPKGYKYEVQIITTVLSTDQQ
NEPDLLSIIGGSAALSISDIPFLGPVGAARVGYIDGEYILNPTADQREESLLDLTVAGTK
DAVIMVEGSAHELPESVMLGAVEFGHRMLQDTIKLQEQLVAVAGKPKHHFDVPEVDEEFT
ARVREWLGDKLKEAVNNPDKVLREEAIAEVKANLIAAMISDDVADPADLTGAVAREFETL
LKEEVRNRILNEGVRPDGRGPKEIRPVSAEVGLLPRTHGSALFTRGQTQIISVVTLGTRR
EEQILDDLGMEESKRFMHHYNFPPYSTGEIRPLRGPSRRDIGHGALVERSLLPVMPSEEE
FPYTVRVVSEVVSSNGSSSMGSVCGSTLALMDAGVPIKAPVSGVAMGLVTGPDGKYVILT
DIQGIEDALGDMDFKVAGTEKGVTGLQMDIKTTGITFDIMREAFEQAREGRMYILGKMLE
AIPEVRSTLSGYAPRILTMKINPEKIGAVIGPGGKTIRAITDATGSQIDIEDDGTILIYS
TNAEGAEEARRRIEMLTRDIEVGQVYTGKVVGIMPYGAFVELAPGKDGLVHISELSDTRV
NRVEDVVKLGDEITVMVTDIDRNGKISLSRRAVLTGETPSSRQSGKLAVASGSQGSKPSR
GGRPSGKPRSSER
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgattagcaagtttgagactatctgggcaggacggaaactatctatagaaacaggcagg
atagctggccaggcacacggagctgtgctggtccagtacggagataccgtggtccttacc
acggccgtgagggcggacgcaccctccaacatggacttcttcccgctgacggtgcagtac
gaggagcggatgtacgcggcgggcaagatccctgggggcttcatccgccgtgagggcagg
ccctcggagaacgcaacgctggccgcaaggctgaccgaccgccctctgcgccctctcttc
ccgaagggctacaagtacgaggtacagatcatcaccacggtgctcagcaccgaccagcag
aacgagcccgacctcctctcgataatcggcggcagcgcggccctgagcatctcggacatc
cccttcctggggcccgtgggtgcggcgagagtggggtacatagacggcgagtacatactc
aaccccaccgccgaccagcgggaggagagcctgctggacctgacggtggcgggcacgaag
gacgccgtgatcatggtggagggctccgcgcacgagctgccggagtcggtcatgctgggc
gcggtggagttcggtcacaggatgctgcaggacaccataaagctgcaggagcagctggtg
gctgtggcgggtaagcctaagcaccacttcgacgtccccgaggtggacgaggagttcacc
gcccgggtgcgcgagtggctgggcgacaagctcaaggaggccgtgaacaacccggacaag
gtgctgcgcgaggaggccatagccgaggtcaaggccaacctgatcgcggcgatgatcagc
gacgacgtggcggatcccgcagacctgacgggagccgtggcccgcgagttcgagacgctc
ctgaaggaagaggtgcgcaaccgcatactgaacgagggcgttcgcccggacggaaggggc
ccaaaggagattcgcccagtctcggcggaggtggggctcctgccgcggacacacgggtcg
gcgctcttcacccgcggccagacccagatcataagcgtggtgacgctgggcaccaggcgc
gaggagcagatcctcgacgacctgggcatggaggaatccaagcgcttcatgcaccactac
aacttcccgccatatagcacgggcgagatcaggccgctgcgaggccccagcaggcgcgac
ataggccatggcgccctggtggagaggtccctgctgccggtcatgccctcggaggaggag
ttcccctacacggtccgcgtggtctccgaggtggtcagctccaacggctccagctcgatg
ggcagcgtgtgcggctcgacgctggcgctgatggacgctggcgtgccgatcaaggcgccg
gtctccggcgtggcgatgggcctggtcacgggcccggacggcaagtacgtgatcctgacg
gacatccagggcatcgaggacgcgctgggagacatggacttcaaggtggcgggcaccgag
aagggcgtcacaggcctgcagatggacatcaagaccaccggcataaccttcgacatcatg
agggaggcgttcgagcaggcgcgcgagggcaggatgtacatcctgggcaagatgctggag
gcgatacccgaggtccgcagtaccctctccgggtacgcgccgcgaatcctcacgatgaag
atcaaccccgagaagatcggcgcggtgatagggcccggcggtaagacgatcagggcgatc
accgatgcaacggggtcccagatcgatatcgaggacgacggcacgatcctgatctactcg
acgaacgccgagggggccgaggaggccaggcggcgcatcgagatgctcacccgcgacata
gaggtggggcaggtctacaccggcaaggtggtagggatcatgccctacggggcgttcgtg
gagctggcgcccggcaaggacggtctggtgcacatcagcgagctgtccgatacgcgggtg
aaccgtgtggaggatgtggtcaagctgggcgacgagatcaccgtgatggtgacggacata
gaccgcaacggcaagataagcctctcgaggcgcgctgtcctgacgggtgaaacgccatcc
tccaggcagtcgggcaagctggcggtggcctccggatcccagggatccaagccctccagg
ggtgggcgcccctccggcaagccccgatcctcagagcgataa
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