Thermobaculum terrenum: Tter_1836
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Entry
Tter_1836 CDS
T01134
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
ttr
Thermobaculum terrenum
Pathway
ttr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ttr00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Tter_1836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttr03021
]
Tter_1836
Transcription machinery [BR:
ttr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Tter_1836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Exonuc_VII_L
Sigma70_r4_2
LepB_N
SesA
Motif
Other DBs
NCBI-ProteinID:
ACZ42742
UniProt:
D1CD77
LinkDB
All DBs
Position
1:1974765..1976555
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AA seq
596 aa
AA seq
DB search
MVPISGSINSKPTPSDQEGEIYKYVSNRRDTSYRAGMRMKNQENDADYVDLEIEESLQDP
EDLEDLEGTNLDDPIRLYLREIGKENLLSQEQEIELARKNERGNYLSNIRSSLQGLDPSQ
FTEQLAVTLITDLESSLQAAKELYTHIFPADSIPDYWVELIERVVQHLGLESRVEQTTEQ
SDEDSESKGIYSEIDWAIVRLHILQELAPADISEKIVRTSYRPFDFTSDLIKHFGANQAD
IQDKITKWIAEGDIARKRLIEANLRLVVSIAKKYTGRGITLLDLIQEGNIGLIKAVEKFR
HQKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMGEAINKIAQARRRLTQELGREPTE
QEIANYLGIPVEKIREVQKISQEPISLENPVGEEEDTSLGDFIQDHKAPAPMDAASQSLL
RDQIDQVLKHLSERERGVLLMRFGLDCEPRPYREVAHILAVSPNQVMQAESRVLDMVAAR
LSPEDYQMLLDRFGHLDRSPMSEESFRLKYKLTQTQLREIDQKLREALASVMLHVPAPER
DMMRFRFGLDIGQPRTLEEVGRAFGVTRERIRQIESKALRKLRRDVFRRQLEDLLS
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggtaccaatatcaggctcgataaactccaaacctactccttccgatcaggaaggagag
atctataagtatgtttctaaccgacgggacacttcttacagagcaggcatgagaatgaag
aatcaggaaaatgatgctgattatgtcgacctcgagattgaggaaagcctgcaggatcca
gaggatcttgaggatcttgaagggacaaacttagatgatcctataaggctctatctaagg
gaaataggcaaggagaaccttctaagtcaggaacaagaaatagagctagccagaaagaac
gaaagaggcaattatctctcaaatattcgatcctcactgcaaggacttgacccatctcag
ttcaccgagcagctggctgtcacactcatcaccgatctggagagttccttgcaggcagca
aaggaattgtatactcatatattccctgccgatagtattccagactactgggttgaacta
atagaaagagttgtccaacacctaggattggaatctagggtagaacaaaccacagaacag
tcggatgaagattcagaatccaaaggcatctattctgagatagattgggccatagttagg
ttgcacatactacaagagctggcgcctgcagatatttccgagaagatagttaggactagt
tataggccatttgacttcacgtcggatttgataaaacactttggtgctaatcaagctgat
atacaagataagatcaccaagtggatagcagaaggtgatattgccaggaagaggctcata
gaggcaaatctgcgcctggtagtcagtatagctaagaagtataccggtaggggcataacc
ttattagacttgatacaggaaggtaacatagggctaatcaaagccgttgaaaagtttagg
caccaaaagggatataagttctcaacctacgccacttggtggattaggcaagcaataacc
agagccattgcagaccaagcccgtactatacgcataccagtccacatgggcgaggcgatt
aacaaaattgcccaggccagaagaaggttaactcaagaactagggagagagcctacagaa
caagagatagcaaactacttggggattccagtagaaaaaatcagagaggtacagaagata
tcacaggagcccatatctctggagaaccctgtaggagaggaagaggacacctcgcttgga
gacttcatacaagatcataaggctcctgcccctatggatgcggcatcccaatccctcttg
agggatcagatagatcaggtacttaagcacctgagcgagagggagagaggggtcctgctg
atgcgattcggcttggactgtgaacctcgtccatacagagaggtagcacatatactcgct
gtgtctcctaatcaagtcatgcaggctgaaagccgagtgctcgacatggttgcagccagg
ctctctccagaggactatcagatgttgctcgatagatttgggcacctagataggtctccc
atgagtgaagaaagctttcgcctcaaatacaagctaactcagacacagctaagggagatc
gaccaaaagctacgcgaagctctggcatccgtgatgttacatgttccagctcctgaaagg
gatatgatgaggttcaggtttggcctagatataggacaacctagaactctggaagaagtt
ggtagagcctttggagtaaccagggagaggatcaggcagatagaatcaaaggctcttcgc
aaacttcgccgagatgtattccgaaggcagctggaagatctgctatcttaa
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