Thermus thermophilus SG0.5JP17-16: Ththe16_0276
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Entry
Ththe16_0276 CDS
T01867
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tts
Thermus thermophilus SG0.5JP17-16
Pathway
tts03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tts00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ththe16_0276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tts03019
]
Ththe16_0276
03009 Ribosome biogenesis [BR:
tts03009
]
Ththe16_0276
Enzymes [BR:
tts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Ththe16_0276
Messenger RNA biogenesis [BR:
tts03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Ththe16_0276
Ribosome biogenesis [BR:
tts03009
]
Prokaryotic type
rRNA helicases
Ththe16_0276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Hera_DD
Hera_RBD
Helicase_C
ResIII
ERCC3_RAD25_C
Cons_hypoth95
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
AEG32707
UniProt:
F6DD80
LinkDB
All DBs
Position
258862..260394
Genome browser
AA seq
510 aa
AA seq
DB search
MEFKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIA
ERLAPSQERGRKPRALVLAPTRELALQVASELSSVAPHLKVVAVYGGTGYGKQKEALLRG
ADAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSATPPFRQTLL
FSATLPSWAKRLAERYMKNPVLINVIKDEPVTYEEEAVPAPVRGRLEVLSDLLYVASPDR
AMVFTRTKAETEEIAQGLLRLGHPAQAIHGDLSQGERERVLGAFRQGEVRVLVATDVAAR
GLDIPQVDLVVHYRLPDRAEAYQHRSGRTGRAGRGGRVVLLYGPRERRDVEALERAVGRR
FKRVNPPTPEEVLEAKWRHLLARLARVPEKDYRLHLDFAGRLFSEGRVEVVAALLALLLG
GAPAERSLLTGEEGWRTYKATGPRLSLPRLVALLKGQGLEVGKIAEAEGGLYVDLRPGAR
PEVQDFRLEPTRKVEGLREAPGRARRPVRA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggagtttaaagattttcccctgaagccagagatcctggaagccctccacgggcgcggc
ctcactacccccacccccatccaggccgcggccctccccttggccctggagggcaaggac
ctcatcggccaggcccgcacgggcaccggcaagaccctggccttcgccctccccatcgcc
gaaaggcttgcgccaagccaggagagggggcggaagccccgggccctcgtcctcgccccc
acgcgggagctcgccctccaggtggcctcggagctgtcctccgtggccccccacctgaag
gtggtggccgtctacgggggcaccgggtacggcaagcagaaggaggctctcctccggggg
gcggacgcggtggtggccaccccggggcgggccctggactacctgcggcagggggtcttg
gacctctcccgggtggaggtcgccgtcttggacgaggcggacgagatgctctccatgggc
tttgaggaggaggtggaggccctcctttccgccacgccccctttccgccagaccctcctc
ttctccgccaccctcccctcctgggcgaaaaggcttgccgagcgctacatgaaaaacccc
gtcctcatcaacgtcattaaggacgagcccgtcacctacgaggaggaagcggtcccggcc
ccggtgcgggggcggcttgaggtcctctccgaccttctttacgtggcctcccccgaccgg
gccatggtcttcacccggaccaaggcggagacggaggagatcgcccaaggccttttgcgc
ttgggccacccggcccaggccatccacggggacctctcccagggcgagcgggaacgggtc
ctgggcgccttccgccaaggggaggtgcgggtcctggtggccacggacgtggccgcccgc
ggcctggacatcccccaggtggacctggtggtgcactaccgcctgcccgaccgggcggag
gcctaccagcaccgctcgggccgcacgggccgggcgggccggggagggcgggtcgtcctc
ctctacgggcccagggagcgccgggacgtggaggccttggagcgggcggtggggcgccgc
ttcaagcgggtgaacccccctaccccggaggaggtcctcgaggccaagtggcgccacctt
ttggcccgcctcgcccgggtgccggagaaggactaccggctccacctggactttgcgggc
cgcctcttcagcgaggggcgggtggaggtggtggccgccctcctcgccctcctcctgggc
ggggcgcccgcggagcggagcctcctcaccggggaggaggggtggcgcacctacaaggcc
acggggccgaggctctccctgccccggctcgtggccctcttgaaggggcagggcctcgag
gtgggcaagatcgctgaggccgaagggggcctgtacgtggacctccgccccggggcccgg
cccgaggtccaggatttccgcctggagcccacgaggaaggtggagggcctgcgggaggcc
cctggccgcgcccggcgcccggtgcgcgcctag
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