Thermus thermophilus SG0.5JP17-16: Ththe16_0323
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Entry
Ththe16_0323 CDS
T01867
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tts
Thermus thermophilus SG0.5JP17-16
Pathway
tts03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tts00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Ththe16_0323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tts03400
]
Ththe16_0323
Enzymes [BR:
tts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ththe16_0323
DNA repair and recombination proteins [BR:
tts03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Ththe16_0323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
Zn_ribbon_PriA
Zn_ribbon_6
Trm112p
Zn_Ribbon_YjdM
Motif
Other DBs
NCBI-ProteinID:
AEG32754
UniProt:
F6DDK2
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All DBs
Position
307924..310050
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AA seq
708 aa
AA seq
DB search
MRVLQVALPLPLPPMSYLPPLGQEGEEALGRRVAVPFRGEVQVGVVVGEGGRPSLSLRHA
IAYLDPAPYLRPEEILFLEEAARYLFAPLGQVLADFLPPFPPLRHRVRLYPGADPKVLPP
GLGALVDWREARGFDPKLLDLLREAGMLEEELAFREARGVLVPLKPAHPDPGLDRILQVL
RELGFAESQAALARAAGVGVGRVRRLVQEGYIGTASLEEAAPPPAGGSDVAPLHLPERPE
RVNGGRFLERVRVLKGLLGEGDHLVLFPEVSLLERFLAHFPEATPYHGGLSGPVRERFFR
RPRGVVFATYGGLLLPFTPRSLVVVEEGSESYKLSSGSRAFVPPLAELRARLLGVPLTYL
SLVPAVEVLERKGFALPVPKPRLLLLDLRRERGFPVTGRALALLRQVEERGRQAVVLSAR
KGYSALLLCQDCGFRPMCPDCALPLRYHREGKGALVCHQCGHREDPPLLCPRCGSPLLAP
KGPGVDWIREALAERLSLPVYRYAGDGKDDLTPLLEGRPGVVVGTTALLRGPRLPDLALV
LLPLADGFLLESDFRAAERYHRLLWALTELRPGRRPLLVLQTFTPEHPVHRALEAGEVEA
YLWQEKALREALNYPPRVRMVKLEVRHRKEERAREKAFALLEALRAEAKEGEVLGPAPAP
VPRVKGHYVFHLLLRGSTERLARLLGLLDRRQFRLDPDPFHFVGLLED
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggtgctccaggtggcccttcccctgccgcttccgcccatgagctaccttcccccc
ctggggcaggagggagaagaggccttggggcggcgggtggccgttccttttcggggggaa
gtccaggtgggggtggtggtgggggagggggggcggccctccctgagcctccgccacgcc
atcgcctacctggaccccgccccctacctgcgcccggaggagatcctctttttggaggag
gcggcccgctacctcttcgcccccctgggccaggtgctggcggacttcctccctcccttc
ccccctttgcgccaccgggtccgcctctacccgggggcggacccgaaggtactgcccccg
gggcttggggccctggtggactggcgggaggcccggggctttgaccccaagcttttggac
ctcctgcgggaggcggggatgctggaggaagagctcgccttccgggaagcgcggggggtg
ctggtgcccctgaagcccgcccaccccgaccccgggctagaccgcatccttcaggttctg
cgggagctgggcttcgccgaaagccaggcggccttggcccgggcggcgggggtgggggtg
ggccgggtgcgccgtctcgtccaggaggggtacatcggcaccgcgtccctagaggaggcc
gccccacccccggcgggcgggtcggacgtggcgcccctccacctccccgagaggcccgag
cgggtcaacggcgggaggtttctggaacgcgtgcgggtgctcaaggggcttttgggggag
ggggaccacctggtcctcttccccgaggtgagcctcttggagcggtttctcgcccacttc
cccgaggccacgccctaccacggggggctttccggcccggtccgggagcggtttttccgg
aggccgcgcggcgtggtcttcgccacctacggcgggctcctcctcccctttaccccccgc
tctttggtggtggtggaggaggggagcgaaagctacaagctctcctcggggagccgggcc
ttcgtccccccgcttgcggagcttagggcccggctcctcggggtgcccctcacctacctc
tccctggtgcccgcggtggaggttttggagcggaagggtttcgccctgcccgtgcccaag
ccccgccttctcctcttggacctccggcgggagcggggctttcccgtcacggggcgggcc
ctcgccctcctccgccaggtggaggagcgggggcggcaggccgtggtcctctccgcccgc
aaggggtacagcgccctcctcctctgccaggactgcggcttccggcccatgtgccccgac
tgcgccttgcccctgcggtaccaccgggaggggaagggggcgctcgtttgccaccagtgc
ggccaccgcgaggacccgccccttctctgcccccggtgcggctcccccctcctcgccccc
aaggggcccggggtggactggatccgggaggcccttgcggagaggctttcccttcccgtc
taccgctacgccggcgacgggaaggacgacctcacccccctcctcgagggccggccgggg
gtggtggtggggaccacggccctcctcagggggcctaggcttcccgacctcgccctcgtc
ctcctccctttggcggacggcttcctcctggagtcggacttccgggcggcggagcggtac
caccgccttctctgggccctcacggagctcaggcccgggcggaggcccctcctcgtcctc
cagaccttcacccccgagcaccccgtgcaccgggccctcgaggcgggggaggtggaggcc
tacctgtggcaggagaaggccctgcgggaggccctcaactacccgccgcgggtgcgcatg
gtgaagctggaggtgcgccaccgaaaggaggagcgggcccgggaaaaggccttcgccctc
ctggaggccttgcgggccgaggcgaaggagggagaggtcctgggccccgcccccgctccc
gtgccccgggtgaaggggcattacgtttttcacctcctcctccgggggagcacggagcgg
ctcgcccgcctcctcggcctcctggaccggcggcagttcaggctggaccccgaccccttc
cacttcgtggggcttttggaggactag
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