Thermus thermophilus SG0.5JP17-16: Ththe16_0405
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Entry
Ththe16_0405 CDS
T01867
Name
(GenBank) Holliday junction ATP-dependent DNA helicase ruvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
tts
Thermus thermophilus SG0.5JP17-16
Pathway
tts03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tts00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Ththe16_0405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tts03400
]
Ththe16_0405
Enzymes [BR:
tts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ththe16_0405
DNA repair and recombination proteins [BR:
tts03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Ththe16_0405
RecFOR pathway proteins
Ththe16_0405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
Sigma54_activ_2
TIP49
Mg_chelatase
AAA_22
AAA_14
nSTAND3
Rad17
TsaE
Bac_DnaA
NTPase_1
AAA_3
ABC_tran
AAA_18
bpMoxR
AAA_33
NB-ARC
RNA_helicase
IstB_IS21
AAA_17
NPHP3_N
DUF815
NACHT
AAA_24
AAA_28
AAA_25
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
AEG32835
UniProt:
F6DE06
LinkDB
All DBs
Position
complement(385836..386810)
Genome browser
AA seq
324 aa
AA seq
DB search
MEDLTLRPKTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAH
ELGVNLRVTSGPAIEKPGDLAAILANSLEEGDILFIDEIHRLSRQAEEHLYPAMEDFVMD
IVIGQGPAARTIRLELPRFTLIGATTRPGLITAPLRSRFGIVEHLEYYTPEELAQGVMRD
ARLLGARITEEAALEIGRRSRGTMRVAKRLFRRVRDFAQVAGEEIITRERALEALAALGL
DELGLEKRDREILEVLILRFGGGPVGLATLATALSEDPGTLEEVHEPYLIRQGLLKRTPR
GRVATELAYRHLGYPPPVGPLLEP
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
gtggaagacctcacccttaggcccaagaccctggacgagtacatcggccaggagcgcctg
aagcaaaagctccgggtctacctcgaggcggccaaggcccgaaaagaacccttagagcac
ctcctcctcttcggccccccgggcctgggcaagaccaccctggcccacgtcatcgcccac
gagcttggggtcaacctccgggtcacctccgggcccgccatagagaagcctggggacctc
gccgccatcctggccaactccctggaggaaggggacatcctcttcattgacgagatccac
cgcctgagccgccaggccgaggagcacctctaccccgccatggaggacttcgtcatggac
atcgtcatcggccaaggcccggcggcgaggaccatccggctggagcttccccgcttcacc
ctgatcggggccaccacccggcccggcctgatcaccgcgcccttaaggagccgcttcggc
atcgtggagcacctggagtactacacccccgaggagctggcccagggggtgatgcgggac
gcccgcctcctcggggcaaggatcacggaggaggccgccctggagatcggtaggcggagc
cggggcaccatgcgcgtcgccaagcgcctcttccggagggtgcgggacttcgcccaggtg
gcgggggaggaaatcatcacccgggaaagggccctggaggcccttgcggccctgggcttg
gacgagctgggcttggagaagcgggaccgggagatcctggaggtcctcatcctccgcttc
ggcggtggcccagtgggcctcgccaccctggccaccgccctctccgaggacccgggcacc
ttggaagaggtgcacgaaccctacctcatccgccagggccttttgaagcgcaccccccgg
ggccgggtggccacggaactggcctaccgccacctgggctatccgcccccggtgggcccc
ctcttggagccgtga
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