Thermus thermophilus SG0.5JP17-16: Ththe16_1438
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Entry
Ththe16_1438 CDS
T01867
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tts
Thermus thermophilus SG0.5JP17-16
Pathway
tts03420
Nucleotide excision repair
tts03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tts00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ththe16_1438
03430 Mismatch repair
Ththe16_1438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tts03400
]
Ththe16_1438
Enzymes [BR:
tts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ththe16_1438
DNA repair and recombination proteins [BR:
tts03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ththe16_1438
MMR (mismatch excision repair)
Other MMR factors
Ththe16_1438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_11
DUF3553
FGF
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEG33840
UniProt:
F6DIL2
LinkDB
All DBs
Position
complement(1380376..1382454)
Genome browser
AA seq
692 aa
AA seq
DB search
MSDALLAPLNEAQRQAVLHFEGPALVVAGAGSGKTRTVVHRVAYLVARRGVFPSEILAVT
FTNKAAEEMRERLRGLVPGAGEVWVSTFHAAALRILRVYGERVGLRPGFVVYDEDDQTAL
LKEVLKELALSARPGPIKALLDRAKNRGVGLKALLGELPEYYAGLSRGRLGDVLVRYQEA
LKAQGALDFGDILLYALRLLEEDEEVLRLVRKRARFIHVDEYQDTSPVQYRFTRLLAGEE
ANLMAVGDPDQGIYSFRAADIKNILDFTRDYPEARVYRLEENYRSTEAILRFANAVIVKN
ALRLEKALRPVKRGGEPVRLYRAEDAREEARFVAEEIARLGPPWDRYAVLYRTNAQSRLL
EQALAGRGIPARVVGGVGFFERAEVKDLLAYARLALNPLDAVSLKRVLNTPPRGIGPATW
ARVQLLAQEKGLPPWEALKEAARTFPRAEPLRHFVALVEELQDLVFGPAEAFFRHLLEAT
DYPTYLREAYPEDAEDRLENVEELLRAAKEAEDLQDFLDRVALTAKAEEPAEAEGKVALM
TLHNAKGLEFPVVFLVGVEEGLLPHRNSLSTLEGLEEERRLFYVGITRAQERLYLSHAEE
REVYGRREPARPSRFLEEVEEGLYEVYDPYRRPPSPPPHRPRPGAFRGGERVVHPRFGPG
TVVAAQGDEVTVHFEGVGLKRLSLKYAELKPA
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgccctcctagcccccctcaacgaggcccaacgccaggcggtccttcacttt
gaggggcctgccctggtggtggccggggcggggagcgggaagacccgcaccgtggtccac
cgggtggcctacctcgtcgcccgccggggggtcttcccctcggagatcctggccgtcacc
ttcaccaacaaggccgccgaggagatgcgggagcgcctccgggggctggtcccgggggcg
ggggaggtctgggtctccaccttccacgccgccgcgctaaggatcctccgcgtctacggg
gagcgggtgggcttaagacccggtttcgtggtctacgacgaggacgaccagaccgccctc
ctcaaggaggtcctgaaggagctcgccctctcggcccggcccggccccatcaaggccctt
ttggaccgggcgaagaaccggggcgtgggccttaaggccctcctcggcgagcttcccgag
tactacgccgggctttcccggggaaggcttggggacgtcctggtgcgctaccaggaggcc
cttaaggcccagggggccttggacttcggggacatcctcctctacgccctgaggctttta
gaggaggacgaggaggttctcaggctcgtgcgcaagcgggcccgcttcatccacgtggac
gagtaccaggacacgagccccgtccagtaccgcttcacccggcttctcgccggggaggag
gccaacctcatggccgtgggcgaccccgaccaggggatctactccttccgggcggcggac
atcaagaacatcctggacttcacccgggactaccccgaggcccgggtctaccgcctggag
gagaactaccgctccaccgaggccatcctccgcttcgccaacgccgtgatcgtgaagaac
gccctccgcctggagaaggccctgcgcccggtgaagcggggcggggagcccgtgcgcctc
taccgggcggaggacgcccgggaggaggcccgcttcgtggccgaggagatcgcccggctc
ggccccccctgggaccggtacgccgtcctctaccgcaccaacgcccaaagccgccttctg
gagcaggcgttggcggggcgggggatcccggcgcgggtggtgggcggcgtgggcttcttt
gaaagggccgaggtcaaggacctcctggcctacgcccgcctcgccctcaaccccctggac
gccgtgagcctaaagcgggtcctgaacaccccccctcggggcatcggtccggccacctgg
gccagggtgcagctcctcgcccaggagaaggggcttcctccctgggaggccctgaaggag
gcggcgaggaccttcccccgcgccgagcccctgaggcacttcgtggccctggtggaggag
cttcaggacctggtcttcggccccgccgaggccttcttccgccacctcctcgaggccacc
gactaccccacctacctccgggaggcctaccccgaggacgccgaggaccgcctggaaaac
gtggaggagctcctcagggcggccaaggaggcggaggacctgcaggacttcctggaccgg
gtggccctcaccgccaaggcggaggagcccgccgaggcggaaggaaaggtcgccctcatg
accctgcacaacgccaaggggctggagttccccgtggtcttcctcgtgggggtggaggag
gggcttttgccccaccgcaactctttaagcaccctcgagggcctggaggaggagcgccgc
ctcttctacgtgggcatcacccgggcccaggagaggctctacctctcccacgccgaggag
cgggaggtctacggcaggcgggagcccgcccggccgagccgctttctggaggaggtggag
gaggggctatatgaggtgtacgacccctaccggcgcccgccctccccgcccccccaccgc
ccgaggcccggggctttccggggcggggagcgggtggtccacccccgcttcggccccggc
accgtggtggcggcccagggggacgaggtcacggtccactttgagggggttgggctcaag
cgcctttccctcaagtacgcggagcttaagccggcatga
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